Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2214 ATGGACACAACTTGCATACGATTTGCTTTAAGAGCCATACTCCTCCACCTGCTATTGTTGTCCCTCCCTAAACTTTCCATAGCAGAGTTTATTTATAGTCCCCATGAGATCTTCAGCATCCACTGTGGCTCATCCACCAACTTCTCCACCCGCGATGGTCGGAATTGGACTCCAGACATCAAATTCCTCACAGCTCAAAGCCACCACTCATTTGCTGCTCCAGCACTCACACCATCTACCATACAGGGTCCTTATACCATTGCTCGTCTCTCTCACTCCCAATTCGCTTACTCGTTCCCCGTCACTGCAGGCCCAAAGTTTCTTCGCCTCTTCTTCTACTCAACTTCATACCAAAACTTTGATCGCACCAATGCCTATTTCTCAGTCAGATTTGGCCCATACACATACACCCTCCTTCAAGATTTCAATGCTTCCCTCAATGCTGATGTTTATAACGACCCTGCCCAACCGGACATCTTGTTCAGAGAGTATTGCATCAACATCAGAGAAGGTGAGAGGCTCGACATAACCTTCATTCCAACCATCACAGTCCAGCATCAAGATTCGTACGCTTTCATCAATGGAATAGAGATTGTTTCAATGCCCCCTTTTCTCTACTACACCAATCCTGACGACGTCGACATCACTTGGCTGCCTCAACCCGTTGGCCTCAATACGAACCCGTTCCCCATTGAAAACAACTATGCTATGGAGACAAAGTATCGGTTAAGAGTTGGAGACCAAGAAATCCCTGCCTCACAGGACACGGGTATGCTCAGGAGCTGGGATGTGGATAACAAATATGTAACGACTCAAAGTGTACTATCTCTAGATATTGACTCTGGAATTAAGCTGAGATTCACAAAGACTCCTAACTACACGGCACCAGACACAGTGTACCGATCCCTAAGGAATATGGGAAGTAATGGCACCGTCAACATGGGGTTCAACCTCACATGGCAACTTCCCGTTGATTCAGGCTTCACCTACTTGCTAAGATTACACTTTTGCCAGCTTGACCCGAATATTAGCCATCCTGGTGACCAGAGCTTCTTCATCTACGTTCAGGATCAGTTGGTTGAAAAGTGGGCAGACATTCTCGGTTGGAGCGATAAACAGAAGGGTGTCCCAGTGGTTAAACAGTATGTAGTTTTCATCCCAGGGAATCAGCAGGAAACGCTTAATCTTTCACTGAAAATGCATCCTAACCCTCAAAGCTTGGCCAAGGACGCTCAAATAAACGCAATTGAACTCTTCAAGATCAACGACCCAACAGGTAATCTCGCTGGACCTAATCCAGACCCTCTTCCACAATCTCCAAAGCGGGTTCCACTTGAAACCTCAAATAAGAAAAGCCATGGCACCACCATGAGAACTCTTGCTGCCATTGCAGGTTCAGTTTCCGGTTTCCTTTTGCTCTCCTTTATTGCTATCCTCATCAAACGCAGGAAGAATGTCGCTGTCAATGAAAGTTCAAATAAAAAAGAGGGAACTTCTCGGGACAATGGCTCACTATCTGTACCAACGGGCCTCTGCCGCCACTTCTCAATCAAAGAAATGAGAACTGCCACCAACAACTTTGATGAACTCTTCGTGGTTGGCGTGGGAGGCTTCGGCAATGTGTACAAAGGCCACATCGACAATGGTTCAACTACAGTCGCAATCAAAAGGCTCAAACAGGGTTCTCGGCAAGGTATTCGCGAGTTCAAGAACGAGATCGAAATGTTGTCTCAACTTCGTCATCCCAATATTGTTTCCCTCATCGGTTACTGTTACGAGAGCAATGAGATGATCCTGGTTTACGAATTCATGGATTGTGGAAACCTCCGTGATCATCTCTACGACACTGATAACCCGACTCTGTCGTGGAAGCATAGGCTGCAGACATGCATAGGCGTTGCGCAAGGATTGGATTATCTGCATACAGGTGTGAAGCAGGTGATAATTCACCGTGACGTCAAGAGTGCCAATATCTTATTGGATGAGAAATGGGAGGCCAAGGTTTCAGATTTCGGGTTAGCCAGAATTGGGGGGCCGATGGGTATTTCGATGATGACCACCAGCGTGAACACTGAGGTGAAAGGTAGCATTGGATATTTGGATCCAGAGTATTACAAGCGTAACATTTTGACGGAGAAATCTGACGTGTACTCATTTGGGGTGATGCTGTTGGAGGTGTTATCTGGGAGGCACCCTTTGCTCCATTGGGAGGAGAAGCAACGAATGTCACTTGTTAAATGGGCAGAGCATTGCTATGAGAAGGGAATTCTGAGTGAGATTGTGGATTCAGAACTCAAGGGTCAGATAAAACCTCAATGTTTGCACAAATTTAGTGAGGTGGCACTGAGCTGTTTGCTTGAGGACGGGACTCAAAGGCCCTCCATGAAGGACATCGTTGGGATGCTGGAGTTGGTTTTGCAGCTTCAGGATAGTGCTGTTAATTATGAAGATAGCAGTAGCCATAGTACTGTACCTCTTTCAGATTGTAGTGAGAACACTGGATTGAGCACGACAAGTGATGGAGATCGTAGCTATGGCAGGATGGAATCTTTTGTGTTGATACCGGATGATGTTTTCTCTGAGACTAAGAATCCAAAGCGACGGTGA 2607 0.4622 MDTTCIRFALRAILLHLLLLSLPKLSIAEFIYSPHEIFSIHCGSSTNFSTRDGRNWTPDIKFLTAQSHHSFAAPALTPSTIQGPYTIARLSHSQFAYSFPVTAGPKFLRLFFYSTSYQNFDRTNAYFSVRFGPYTYTLLQDFNASLNADVYNDPAQPDILFREYCINIREGERLDITFIPTITVQHQDSYAFINGIEIVSMPPFLYYTNPDDVDITWLPQPVGLNTNPFPIENNYAMETKYRLRVGDQEIPASQDTGMLRSWDVDNKYVTTQSVLSLDIDSGIKLRFTKTPNYTAPDTVYRSLRNMGSNGTVNMGFNLTWQLPVDSGFTYLLRLHFCQLDPNISHPGDQSFFIYVQDQLVEKWADILGWSDKQKGVPVVKQYVVFIPGNQQETLNLSLKMHPNPQSLAKDAQINAIELFKINDPTGNLAGPNPDPLPQSPKRVPLETSNKKSHGTTMRTLAAIAGSVSGFLLLSFIAILIKRRKNVAVNESSNKKEGTSRDNGSLSVPTGLCRHFSIKEMRTATNNFDELFVVGVGGFGNVYKGHIDNGSTTVAIKRLKQGSRQGIREFKNEIEMLSQLRHPNIVSLIGYCYESNEMILVYEFMDCGNLRDHLYDTDNPTLSWKHRLQTCIGVAQGLDYLHTGVKQVIIHRDVKSANILLDEKWEAKVSDFGLARIGGPMGISMMTTSVNTEVKGSIGYLDPEYYKRNILTEKSDVYSFGVMLLEVLSGRHPLLHWEEKQRMSLVKWAEHCYEKGILSEIVDSELKGQIKPQCLHKFSEVALSCLLEDGTQRPSMKDIVGMLELVLQLQDSAVNYEDSSSHSTVPLSDCSENTGLSTTSDGDRSYGRMESFVLIPDDVFSETKNPKRR* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2214 868 Gene3D Transferase(Phosphotransferase) domain 1 604 826 - -
Gso18g2214 868 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 30 835 - -
Gso18g2214 868 SUPERFAMILY Protein kinase-like (PK-like) 501 804 IPR011009 -
Gso18g2214 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 648 660 IPR008271 GO:0004672|GO:0006468
Gso18g2214 868 ProSiteProfiles Protein kinase domain profile. 527 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2214 868 Gene3D - 35 201 - -
Gso18g2214 868 Gene3D - 235 422 - -
Gso18g2214 868 Pfam Malectin-like domain 40 421 IPR024788 -
Gso18g2214 868 MobiDBLite consensus disorder prediction 817 843 - -
Gso18g2214 868 Gene3D Phosphorylase Kinase; domain 1 512 603 - -
Gso18g2214 868 Pfam Protein tyrosine and serine/threonine kinase 533 801 IPR001245 GO:0004672|GO:0006468
Gso18g2214 868 CDD STKc_IRAK 542 803 - -
Gso18g2214 868 PANTHER OS07G0166700 PROTEIN 30 835 IPR045272 GO:0004714|GO:0006468
Gso18g2214 868 MobiDBLite consensus disorder prediction 427 452 - -
Gso18g2214 868 ProSitePatterns Protein kinases ATP-binding region signature. 533 556 IPR017441 GO:0005524
Gso18g2214 868 SMART serkin_6 527 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2214 Gso-Chr18 55111161 55114140 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2214 27 868 Receptor kinase-like Gene Family AT3G51550 43.973 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2214 Malectin_like 2.1e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2214 - - gmx:100779523 1433.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2214 18 55111161 55114140 Gso8g2047 8 21717547 21723786 GST