Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2211 ATGGACACAACTAGCACCCAAATTGCTTCAGGGACCATCCTCTTCCTTCTGTTGCTGTTCTTTTCTTATCTTTCCATAGCAGATGTTATTTATAGTCCCGTTGAACTCTTCAGCATCAACTGTGGATCTTCCAGTAGCTTGTCCACTCGCGATGGTCGCAATTGGACTGCAGACATCAAATTCCTCTCAGAAAACAAGGACTCAGTTGCTGCTCCTGCACTCACACCATCTACCCTGGAAGGTCCTTACACCGATGCTCGTTTCTCTCACTCCCAATTCACTTACTCTTTCCCTGTCTCCACAGGCCCTAAGTTTCTTCGCCTCTTCTTCTACTCAACTTCCTACCAAAACTTCCATCGCTCCGAAGCCTATTTCTCAGTCAAAGCAGGCCTATACACCCTCCTTCAAAATTTCAACGCTTCCCTCCATGCTGATGCTGGTAACGAGCCTGGCGACTACTTGTTCAGGGAGTATTGCATCAACCTCAAAGATGGCGATCGGCTCAACATAACCTTCATTCCAAGCAAAACATCTCAGCATCCAGATTCGTACGCTTTCATCAATGGAATAGAGATTGTTTCAATGCCCCCTTTTCTCTACTACACCAATCCTGACGACGTCGGCATCACTTGGTTGCCTCAACTCGTTGGCCTCAATACGAACCCGTTCCCCATTGAAAAAAACTTTGCTCTGGAGACAAATTATCGGTTAAGAGTTGGAGACCAACAAATCCCGGCCTCACAGGACACGGGTATGCTCAGGAGCTGGGATGTGGATAACAAATATGTAACGACTCAAAGTGTACAATCTCTAGATATTGCCACTGGAATTAAGCTGAGATTCACAAAGAAGACTCCTAACTACACTGCACCAGACACAGTGTACCGATCCGTAAGGAATATGGGAAGTAATGGCACCATCAACATGGGGTTCAACCTCACATGGCAACTTGCCGTTGATTCAGGCTTCACCTACTTGCTAAGGTTACACTTTTGCCAGCTTGACCCGAATATTAGCCATCCTGGTGACCAGAGCTTCTACATCTACGTTCAGGATCAGTTGGTTGAAGACTGGGCAGACATTCTCGGTTGGAGCGATAAACAGAAGGGTGTCCCAGTGGTTAGACAGTATGCAGTTTTAATCCCAGGGAATGAGCAGGAAACGCTTAATCTTTCACTGAAAATGCATCCTAACCCTAAAAGCTTGGCCAAGGACGCTCAAATAAACGCAATTGAGCTATTCAAAATCAACGACTCAACTGGTAGTCTTGCTGGGCCAAACCCAAACCCAGACCCAGACCGTCTTCCAGAAACCCCCAAGGTTCCCCTTCAAAGACCAAACAATAAAAGCAGCGGCACCACAAGAACCCTTGCCGCCGCCGTGGCAGGTGCAGTTTCTGCTGCTGTTTTTCTCTCCTTTATTGTCGCTTTCTTCCTCATCAAACGCAAGAAGAAGATGGGTTCCAAGAAAAAAGACGGAACTCCTCTGGGCGGTGGCTTATCATCACTACCAACCAGCCTCTGCCGCCACTTCTCAATCGTGGAAATCAGGGCCGCCACCAACAACTTCGACGAACACTTCGTAGTTGGCATGGGAGGCTTCGGCAACGTGTACAAAGGCTACATCGACGACGGTTCAACCCGAGTCGCAATCAAAAGGCTCAAACCGGATTCTCGGCAAGGTGCGCAGGAGTTCATGAACGAGATCGAAATGCTGTCTCAACTTCGCCATCTCCATCTTGTCTCCCTCGTTGGTTACTGTTACGAGAGCAACGAAATGATACTGGTGTATGATTTCATGGATCGCGGAACCCTCCGTGAGCATCTCTACGACACTGATAACCCTTCCCTTTCATGGAAACAAAGGCTCCAGATATGCATAGGTGCTGCGCGAGGACTGCACTATCTGCATACAGGTGCAAAGCACACGATCATTCACCGTGACGTGAAGAGCACCAACATCTTATTGGATGAGAAATGGGTCGCCAAGGTTTCAGACTTCGGGTTATCCCGAATTGGGCCCATTAGTTCTTCAATGACCCATGTGAGCACTCAGGTGAAAGGTAGCGTTGGATATTTAGATCCGGAGTATTACAAACGACAGCGTTTGACTGAGAAGTCTGATGTGTATTCCTTTGGGGTGGTGCTCTTGGAGGTATTGTCTGGGAGGCAGCCTTTGCTCCGTTGGGAGGAGAAGCAACGAATGTCACTTGTTAATTGGGCAAAGCATTGCTGTGAGAAGGGAACTCTAAGTGAGATAGTGGATGCAAAACTGAAGGGCCAGATAGCGCCTCAGTGTATGCAAAAATATGGTGAGGTTGCGCTGAGTTGTTTGCTTGAGGATGGAACTCAGAGGCCTTCCATGAACGACGTCGTTCGGATGCTGGAGTTTGTTCTGCATCTTCAGGAGGGTGCTGTTAATGAAGTGATGGAGAGTGAAGATACCGAGGACATATTTAGCAGTAGCCATAGTACTCTACATTTTTCGGATTATAGTAAGAGCACTGCATTGAGTATGGCTACAAACGTTGGAGATTTTAGCTATGGAAGTAAGGACTCTGAGGAGAGGTTGATCCCGGACCATGTTTTCTCTGAGATTAAGGATCCAAAGGGACGATGA 2619 0.4754 MDTTSTQIASGTILFLLLLFFSYLSIADVIYSPVELFSINCGSSSSLSTRDGRNWTADIKFLSENKDSVAAPALTPSTLEGPYTDARFSHSQFTYSFPVSTGPKFLRLFFYSTSYQNFHRSEAYFSVKAGLYTLLQNFNASLHADAGNEPGDYLFREYCINLKDGDRLNITFIPSKTSQHPDSYAFINGIEIVSMPPFLYYTNPDDVGITWLPQLVGLNTNPFPIEKNFALETNYRLRVGDQQIPASQDTGMLRSWDVDNKYVTTQSVQSLDIATGIKLRFTKKTPNYTAPDTVYRSVRNMGSNGTINMGFNLTWQLAVDSGFTYLLRLHFCQLDPNISHPGDQSFYIYVQDQLVEDWADILGWSDKQKGVPVVRQYAVLIPGNEQETLNLSLKMHPNPKSLAKDAQINAIELFKINDSTGSLAGPNPNPDPDRLPETPKVPLQRPNNKSSGTTRTLAAAVAGAVSAAVFLSFIVAFFLIKRKKKMGSKKKDGTPLGGGLSSLPTSLCRHFSIVEIRAATNNFDEHFVVGMGGFGNVYKGYIDDGSTRVAIKRLKPDSRQGAQEFMNEIEMLSQLRHLHLVSLVGYCYESNEMILVYDFMDRGTLREHLYDTDNPSLSWKQRLQICIGAARGLHYLHTGAKHTIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPISSSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLSGRQPLLRWEEKQRMSLVNWAKHCCEKGTLSEIVDAKLKGQIAPQCMQKYGEVALSCLLEDGTQRPSMNDVVRMLEFVLHLQEGAVNEVMESEDTEDIFSSSHSTLHFSDYSKSTALSMATNVGDFSYGSKDSEERLIPDHVFSEIKDPKGR* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2211 872 SMART serkin_6 523 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2211 872 PANTHER OS07G0166700 PROTEIN 29 837 IPR045272 GO:0004714|GO:0006468
Gso18g2211 872 Gene3D Transferase(Phosphotransferase) domain 1 600 822 - -
Gso18g2211 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Gso18g2211 872 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 29 837 - -
Gso18g2211 872 ProSiteProfiles Protein kinase domain profile. 523 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2211 872 Pfam Malectin-like domain 39 416 IPR024788 -
Gso18g2211 872 CDD STKc_IRAK 529 796 - -
Gso18g2211 872 Gene3D - 35 195 - -
Gso18g2211 872 Gene3D - 229 417 - -
Gso18g2211 872 Gene3D Phosphorylase Kinase; domain 1 508 599 - -
Gso18g2211 872 Pfam Protein tyrosine and serine/threonine kinase 529 795 IPR001245 GO:0004672|GO:0006468
Gso18g2211 872 MobiDBLite consensus disorder prediction 419 452 - -
Gso18g2211 872 SUPERFAMILY Protein kinase-like (PK-like) 501 799 IPR011009 -
Gso18g2211 872 ProSitePatterns Protein kinases ATP-binding region signature. 529 552 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2211 Gso-Chr18 55070876 55073923 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2211 24 872 Receptor kinase-like Gene Family AT3G51550 47.039 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2211 Malectin_like 8.4e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2211 - - gmx:100776868 1588.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso13g0362 13 15147560 15157030 Gso18g2211 18 55070876 55073923 PCT
Gso18g2211 18 55070876 55073923 Gso13g0362 13 15147560 15157030 PCT