Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2209 ATGGACACAACTAGCACCCAAATTGCTTCAGGGACCATCCTCTTCCTTCTGTTACTGTTCTTTCCTTATCTTTCCATAGCAGATGTTATTTATAGTCCCGTTGAACTCTTCAGCATCAACTGTGGATCTTCCAGTAGCTTGTCCACTCGCGATGGTCGCAATTGGACTGCAGACATCAAATTCCTCTCAGAAAACAAGGACTCAGTTGCTGCTCCTGCACTCACACCATCTACCCTGGAAGGTCCTTACACCGATGCTCGTTTCTCTCACTCCCAATTCACTTACTCTTTCTCTGTCTCCACAGGCCCAAAGTTTCTTCGCCTCTTCTTCTACTCAACTTCCTACCAAAACTTCCATCGCTCCAAAGCCTATTTCTCAGTCAAAGCAGGCCCATACACCCTCCTTCAAAATTTCAACGCTTCCCTCCATGCTGATGCTGGTAACGACCCTGGCGACTACTTGTTCAGGGAGTATTGCATCAACCTCAAAGATGGCGATCGGCTCAACATAACCTTCATTCCAAGCAAAACATCTCAGAATCCAGATTCGTACGCTTTCATCAATGGAATAGAGATTGTTTCAATGCCCCCTTTTCTCTACTACACCAATCCTGACGACGTCGACATCAGTGGATTGCCTCATCTCGTTGGCCTCAATACGAACCCGTTCCCCATTGAAAACAACTATGCTATGGAGACAAAGTATCGGTTAAGAGTTGGAGACCAACAAATCCCGGCCTTAAACGACACGGGTATGCTCAGGAGCTGGGATGTGGATAACAAATATGTAACGACTCAAAGTGTACTATCTCTAGATATTGCCACTGGAATTAAGCTGAGATTCACAAAGAAGACTCCTAACTACACTGCACCAGACACAGTGTACCGATCCGTAAGGAATATGGGAAGTAATGGTACCTTCAACATGGGGTTCAACCTCACATGGCAACTTCCCATTGATTCAGGCTTCACCTACTTGCTAAGGTTACACTTTTGCCAGCTTGACCCGAATATTAGCCGTCCTGGTGACCAGAGCTTCTTCATCTACGTTCAGGATCAGTTGGTTGAAGACTGGGCAGACATTCTCGGTTGGAGCCATAAACAGAAGGGTGTCCCAGTGGTTAAACAGTATGTAGTTTTAATCCCAGGGAATGAGCAGGAAACGCTTAATCTTTCACTGAAAATGCATCCTAACCCTAAAAGCTTGGCCAAGGACGCTCAAATAAACGCAATTGAACTCTTCAAAATCAACGACCCAACAGGTAACCTCGCTGGACCTAACCCAGACTCTCATCCAAAGACCTCCGAGGTTCCTCTTCTGAGCTCAAACAAGAAAAGCAAAGGCAGCACGAGAACCCTAACTGGCGCCGTCGCAGGCGCAGTTTCCGGTGTCGTTATGTTATCCCTTACTGTTGCTTTCTTCCTCATCAAACGCAAGAAGAAGATGGGTTCCAAGAAAAAAGACGGAACTCCTCTGGGCGGTGGCTTATCATCACTACCAACCAGCCTCTGCCGCCACTTCTCAATCGCGGAAATCAGGGCCGCCACCAACAACTTCGACGAACACTTCGTAGTTGGCATGGGAGGCTTCGGCAACGTGTACAAAGGCTACATCGACGACGGTTCAACCCGAGTCGCAATCAAAAGGCTCAAACCAGATTCTCGGCAAGGTGCGCAGGAGTTCATGAACGAGATCGAAATGCTGTCTCAACTTCGCCATCTCCATCTTGTCTCCCTCGTCGGTTACTGTTACGAGAGCAACGAAATGATACTGGTGTATGATTTCATTGATCGCGGAACCCTCCGTGAGCATCTCTACGACACTGATAACCCTTCCCTTTCATGGAAACAAAGGCTCCAGATATGCATAGGTGCTGCGCGAGGACTACACTATCTGCATACAGGTGCAAAGCACATGATCATTCACCGTGACGTGAAGAGCACCAACATCTTATTGGATGAGAAATGGGTCGCCAAGGTTTCAGACTTCGGGTTATCCCGAATTGGGCCCATTAGTTCTTCAATGACCCATGTGAGCACTCAGGTGAAAGGTAGCGTTGGATATTTAGATCCGGAGTATTACAAACGACAGCGTTTGACTGAGAAGTCTGATGTGTATTCCTTTGGGGTGATGCTCTTGGAGGTATTGTCTGGGAGGCAACCTTTGCTCCGTTGGGAGGAGAAGCAACGAATGTCACTTGTTAATTGGGCAAAGCATTGCTGTGAGAAGGGAACTCTAAGTGAGATTGTGGATGCAAAACTGAAGGGCCAGATAGCGCATCAGTGTTTGCAAAAATATGGTGAGGTTGCGCTGAGTTGTTTGCTTGAGGATGGAACTCAGAGGCCTTCCATGAACGACGTCGTTCGGATGCTGGAGTTTGTTCTGCATCTTCAGGAGGGTGCTGTTAATGAAGTGACGGAGAGTGAAGATACCGAGGACCTGTTTAGCAGTAGCCATAGTAGTCTACATTTTTCGGATTATAGTAAGAGCACTGCATTGAGTATGGCTACAAACGTTGGAGATTGTAGCTATGGAAGTAAGGACTCTGAGGAGAGGTTGATCCCGGACCATGTTTTCTCTGAGATTAAGGATCCAAAGGGACGATGA 2607 0.4718 MDTTSTQIASGTILFLLLLFFPYLSIADVIYSPVELFSINCGSSSSLSTRDGRNWTADIKFLSENKDSVAAPALTPSTLEGPYTDARFSHSQFTYSFSVSTGPKFLRLFFYSTSYQNFHRSKAYFSVKAGPYTLLQNFNASLHADAGNDPGDYLFREYCINLKDGDRLNITFIPSKTSQNPDSYAFINGIEIVSMPPFLYYTNPDDVDISGLPHLVGLNTNPFPIENNYAMETKYRLRVGDQQIPALNDTGMLRSWDVDNKYVTTQSVLSLDIATGIKLRFTKKTPNYTAPDTVYRSVRNMGSNGTFNMGFNLTWQLPIDSGFTYLLRLHFCQLDPNISRPGDQSFFIYVQDQLVEDWADILGWSHKQKGVPVVKQYVVLIPGNEQETLNLSLKMHPNPKSLAKDAQINAIELFKINDPTGNLAGPNPDSHPKTSEVPLLSSNKKSKGSTRTLTGAVAGAVSGVVMLSLTVAFFLIKRKKKMGSKKKDGTPLGGGLSSLPTSLCRHFSIAEIRAATNNFDEHFVVGMGGFGNVYKGYIDDGSTRVAIKRLKPDSRQGAQEFMNEIEMLSQLRHLHLVSLVGYCYESNEMILVYDFIDRGTLREHLYDTDNPSLSWKQRLQICIGAARGLHYLHTGAKHMIIHRDVKSTNILLDEKWVAKVSDFGLSRIGPISSSMTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSFGVMLLEVLSGRQPLLRWEEKQRMSLVNWAKHCCEKGTLSEIVDAKLKGQIAHQCLQKYGEVALSCLLEDGTQRPSMNDVVRMLEFVLHLQEGAVNEVTESEDTEDLFSSSHSSLHFSDYSKSTALSMATNVGDCSYGSKDSEERLIPDHVFSEIKDPKGR* 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2209 868 Gene3D Phosphorylase Kinase; domain 1 504 595 - -
Gso18g2209 868 SUPERFAMILY Protein kinase-like (PK-like) 497 795 IPR011009 -
Gso18g2209 868 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 29 833 - -
Gso18g2209 868 Gene3D Transferase(Phosphotransferase) domain 1 596 818 - -
Gso18g2209 868 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Gso18g2209 868 Pfam Malectin-like domain 39 416 IPR024788 -
Gso18g2209 868 PANTHER OS07G0166700 PROTEIN 29 833 IPR045272 GO:0004714|GO:0006468
Gso18g2209 868 Pfam Protein tyrosine and serine/threonine kinase 525 791 IPR001245 GO:0004672|GO:0006468
Gso18g2209 868 ProSitePatterns Protein kinases ATP-binding region signature. 525 548 IPR017441 GO:0005524
Gso18g2209 868 SMART serkin_6 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2209 868 MobiDBLite consensus disorder prediction 421 451 - -
Gso18g2209 868 CDD STKc_IRAK 525 792 - -
Gso18g2209 868 Gene3D - 229 417 - -
Gso18g2209 868 Gene3D - 35 195 - -
Gso18g2209 868 ProSiteProfiles Protein kinase domain profile. 519 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2209 868 MobiDBLite consensus disorder prediction 423 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2209 Gso-Chr18 55044184 55047149 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2209 24 868 Receptor kinase-like Gene Family AT3G51550 46.644 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2209 Malectin_like 7.8e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2209 - - gmx:100776868 1560.43