Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2206 ATGGGTCTTTTTCCACTTTTGTCGTGTTTCTCTATCAATGATCCAGGGGAAAACAGACTACTCGGGACAACAACCTTCAACATCCTGGAAGAACTTTGCACCCACTTTTCACTTGAAGAGATAAAGTCAGCAGTGAGAAACATCAAGAAACCTTCGGTGATTGGAGAAGATTCATTCGGGGTTGTGTACAAAGGTTATCTGAAAAAAGGTGCTACCACTGTTGCAATTAAGTGGTTCAGGAAGGGTTCTCTTTCTGGTCTCTCAGAGTCTCAGTTGAAGAACGAGGTTCTCTTCCTTTGTCAGCTCCACCACCCCAACATCATGCCTTTAATTGGATTTTGCATTGAAAGAGACCACCCCCATCTGATTCTTGTCCATGAATACATGCTTAACGGTGCCCTCAGTGATCACCTTCATCCTAAAAGCAATCACAAAGTTGATCCACTACCGTGGAAAAGGAGGCTTCAAATTTGCATTGGTGTTGCACGTGGATTGCACTATCTACACACAGGAGGCTTGTTGTTGTCCAAAAGGGGAAGTATTGATGTCGCAAATTCATCTCTTGTTGCTAGAAACCATGACACTTTCGCATATTGTGATCCTGAGTATTTGGCAACCGGCATCTTGACTGTGAAATCAAACGTGTTTTCATTTGGGGTGGTTCTATTGGAAGTGAAAAAATAG 684 0.4284 MGLFPLLSCFSINDPGENRLLGTTTFNILEELCTHFSLEEIKSAVRNIKKPSVIGEDSFGVVYKGYLKKGATTVAIKWFRKGSLSGLSESQLKNEVLFLCQLHHPNIMPLIGFCIERDHPHLILVHEYMLNGALSDHLHPKSNHKVDPLPWKRRLQICIGVARGLHYLHTGGLLLSKRGSIDVANSSLVARNHDTFAYCDPEYLATGILTVKSNVFSFGVVLLEVKK* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2206 227 Gene3D Phosphorylase Kinase; domain 1 33 128 - -
Gso18g2206 227 Pfam Protein tyrosine and serine/threonine kinase 52 170 IPR001245 GO:0004672|GO:0006468
Gso18g2206 227 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA ISOFORM X1 5 174 - -
Gso18g2206 227 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA ISOFORM X1 176 225 - -
Gso18g2206 227 SUPERFAMILY Protein kinase-like (PK-like) 29 225 IPR011009 -
Gso18g2206 227 PANTHER OS07G0166700 PROTEIN 176 225 IPR045272 GO:0004714|GO:0006468
Gso18g2206 227 PANTHER OS07G0166700 PROTEIN 5 174 IPR045272 GO:0004714|GO:0006468
Gso18g2206 227 ProSiteProfiles Protein kinase domain profile. 48 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2206 227 Gene3D Transferase(Phosphotransferase) domain 1 130 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2206 Gso-Chr18 55032631 55033480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2206 31 225 Receptor kinase-like Gene Family AT5G38990 40.724 9.28e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2206 PK_Tyr_Ser-Thr 3.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2206 - - gmx:100806251 456.447