Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2205 ATGGCTTCAAGCAATGGCCGAAAAGCAACTGAGATCTTCCAAGGACAAGCTATCTTATACAGATGCATGTTTGCCTTCCTAGATTCCATGTGTCTCAAATCGATTATTGAGCTTGGCATACCAGACATAATCCACAAGCATGGCCAACCCATTACTCTTTCTGAGTTGGTGTCAATTCTGAATGTTCCACCAGCTAGAGTTGGTCACGTGCAAAGTCTCATGCGCTACCTTGCACACCATGGATTCTTTGAAAGACTAAGAATCCATCTTGAAAAAGAATCTTATGCTCTCACTGCTGCTTCAGAGCTACTTGTCAAAAGCAGTGAGCTTTGTTTAACTCCAATGGTTGAGAAAGTGCTTGACCCAACTCTCTCAGCTTCATTCCATCAAATGAAGAAGTGGGTTTATGAGGAAGATCTCTCAGTGTTTGATATCTCCTTAGGCTGTAGTTTGTGGGATTTTCTTAACAAAAACCCTTCATACAATGAGTTATTCAATGAGGCAATGACTAGAGATTCTCAAGTGAGTAACTTGGCATTGAGAGATTGCAAGTTGGTGTTTGAGGGACTGGAATCCATTGTGGACGTTGGTGGTGGAACTGGAGCCACTGCCAAGATGATCTGTGAGGCATTTCCTGACTTGAAATGCGTTGTTCTTGACCGTCCTCGGGTTGTGGAGAACTTGTCAGGAAACAACAATTTGACATATGTTGCTGGGGACATGTTCAAAACTATTCCTAAGGCTGATGCTGTTCTGCTTAAGTGGATTCTTCATGATTGGGCTGATAAAGATTGCAGAAAGATATTAGAGAATTGTAAAGAAGCTATTTCTTCAAATAATGGCAAAAGAGGAAAAATAATTGTCATAGATATGGTCATTAACGAAAAACAAGATGAGCAAAAAATTACTGAACTAAAGCTCCTTTGGGATGTAAGCATGGCATGTGCATTCAATGGAAAAGAGAGAAATGAAGAAGAATGGAACAAACTCTTCATGGAAGCAGGGCTCCAAGACTACAAAATATCTCCCTTGACCGGTCAATCTAGGTTTCTGCTTCCTCCTGCAATTGAAGCGCAAGCTCAAGTTGCATCTCCACTTCGCCCATGTTTGGTCGTTCCATTCCCTGCTTATGCAAACACCTCTCAGTAA 1149 0.4151 MASSNGRKATEIFQGQAILYRCMFAFLDSMCLKSIIELGIPDIIHKHGQPITLSELVSILNVPPARVGHVQSLMRYLAHHGFFERLRIHLEKESYALTAASELLVKSSELCLTPMVEKVLDPTLSASFHQMKKWVYEEDLSVFDISLGCSLWDFLNKNPSYNELFNEAMTRDSQVSNLALRDCKLVFEGLESIVDVGGGTGATAKMICEAFPDLKCVVLDRPRVVENLSGNNNLTYVAGDMFKTIPKADAVLLKWILHDWADKDCRKILENCKEAISSNNGKRGKIIVIDMVINEKQDEQKITELKLLWDVSMACAFNGKERNEEEWNKLFMEAGLQDYKISPLTGQSRFLLPPAIEAQAQVASPLRPCLVVPFPAYANTSQ* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2205 382 Gene3D - 1 104 IPR036388 -
Gso18g2205 382 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 360 IPR016461 GO:0008168
Gso18g2205 382 PANTHER O-METHYLTRANSFERASE 2 349 IPR016461 GO:0008168
Gso18g2205 382 PIRSF O-mtase 1 352 IPR016461 GO:0008168
Gso18g2205 382 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 349 - -
Gso18g2205 382 Pfam O-methyltransferase domain 128 336 IPR001077 GO:0008171
Gso18g2205 382 Gene3D Vaccinia Virus protein VP39 105 352 IPR029063 -
Gso18g2205 382 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 346 IPR029063 -
Gso18g2205 382 CDD AdoMet_MTases 193 289 - -
Gso18g2205 382 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Gso18g2205 382 SUPERFAMILY "Winged helix" DNA-binding domain 10 108 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2205 Gso-Chr18 55028925 55033605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2205 30 341 Monolignol Biosynthesis Gene Families AT5G54160 31.385 4.03e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2205 K22588 - gmx:100776336 766.148