Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2203 ATGCTTATTAAATATTTGGGCTTCTGCTGGTCGAAGCATGCAAGTTCATGTCAGAGGCAATATCCAACGGTGATAGAAGAGCTGTGCCATCAATTTTCATTGGCCGATATTAAGGAATCAACCAAAAAATTTGATGAAGACCAAATAATTGGAACTGGAGATTTTTGTATTGTATATAAAGGTTTTCTCCAAAACAATGGTGTTACTGATGATACAGTTGTAATCAAGCGAATACGTGGGAGCGGTGAGAAAGAGCTTAAGCAGTTCAAGAACGAAATTGAGTTGCTCTGCCAGCTTCGTCATCCAAATTTGATCACTCTATTAGGATTTTGTGTCCACAAAGACGAGAAGATTGTGGTATATGAGCACATGGCCAATGGATCTCTCCATGATCGACTATACTGTAGTGATGTGAAAAAGGAACCACTAACATGGAAGCATAGGCTAAAGATATGCATAGGAGCAGCACATGGACTACACTACCTTCACACAGGTGCCAAGCGAACCATCTTTCATCGTGACATAACACCTTATAAAATTCTTTTGGATAGAAACATGGTGGCCAAACTCGCGGATTTTCGGCTTTCCTTAAAAGGACCGCATTATGCATCAAAGCCAAAACCCAAGACAATATCAAAAGACGGCTTTATAGTGCTACTAGAAGTAGTATGCAAAGACAAGCTTAAAAATGTTGAGAAGAGGCAGAAGCACCCTGTTGAGGAGAATATTGATCCGAATCTCAAAGGCAAGATTGCACCAGAGTGTTGGGAAGTATTTATTGATATCACAGAAAGATGCTTGAAGTTTGATCCAGATGAGCGGCCGGCAATGGGTGAAGTGGAGGTGCAACTTGAGCTTGCTCTGTCATTGCAGGAAGAAGCAGATATGAGAAATACTTGTGATGATTATACCCTATTATCTATGACCATTATTAATTAG 939 0.4015 MLIKYLGFCWSKHASSCQRQYPTVIEELCHQFSLADIKESTKKFDEDQIIGTGDFCIVYKGFLQNNGVTDDTVVIKRIRGSGEKELKQFKNEIELLCQLRHPNLITLLGFCVHKDEKIVVYEHMANGSLHDRLYCSDVKKEPLTWKHRLKICIGAAHGLHYLHTGAKRTIFHRDITPYKILLDRNMVAKLADFRLSLKGPHYASKPKPKTISKDGFIVLLEVVCKDKLKNVEKRQKHPVEENIDPNLKGKIAPECWEVFIDITERCLKFDPDERPAMGEVEVQLELALSLQEEADMRNTCDDYTLLSMTIIN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2203 312 SUPERFAMILY Protein kinase-like (PK-like) 22 288 IPR011009 -
Gso18g2203 312 Pfam Protein tyrosine and serine/threonine kinase 47 198 IPR001245 GO:0004672|GO:0006468
Gso18g2203 312 PANTHER OS07G0166700 PROTEIN 217 307 IPR045272 GO:0004714|GO:0006468
Gso18g2203 312 PANTHER OS07G0166700 PROTEIN 14 207 IPR045272 GO:0004714|GO:0006468
Gso18g2203 312 Gene3D Transferase(Phosphotransferase) domain 1 218 307 - -
Gso18g2203 312 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2203 312 Gene3D Transferase(Phosphotransferase) domain 1 124 217 - -
Gso18g2203 312 Gene3D Phosphorylase Kinase; domain 1 5 123 - -
Gso18g2203 312 PANTHER TYROSINE KINASE FAMILY PROTEIN 217 307 - -
Gso18g2203 312 PANTHER TYROSINE KINASE FAMILY PROTEIN 14 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2203 Gso-Chr18 55011390 55013693 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2203 26 302 Receptor kinase-like Gene Family AT3G51550 39.241 1.99e-60 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso18g2203 PK_Tyr_Ser-Thr 7.4e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2203 - - gmx:100775244 613.609