Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2196 ATGTCTGGAAAGGCTTTGAAATCCTTGAAGGATGAAAACCCAGATTTGCAGAAGCAAATTGGTTGCATCACTGGATTTTTTCAGCTCTTTGACCGCCATCGTTTCCTCACAGGCCAACGCTCTGCCACCTACGTTCAGCACAGGCCTACTTCAGGTGGAAGCAGTAATGAAATCAAAGAGCTCAATGGTACAATGCAGAAAGCTAAGGCAAAGAATCTGAAGACTGCTAGAGAAAAGCAACAATTCTCCACAGAATCATCCATAACTTCTTTGTCTTCGTCATCTTGTTCATCTAGCATGTCATCCCATGAGTTTAACAAAACAATTCAGATACAATCACCGTCAAGAAATCAAATCAGAATTCCAGAAAACACAAATTCAAAAGCGGCAAAGAAGCAACCTCATAAGCCGCACCAGCAATCCCTTCATTTCCATCATATTGTCAATGACTCAATGCATAAAGAAACTCGACGATTGTCAGTGAAAACTGGGGCTAAAGAGGAAAAGAAGGGTCAGACTAATGCCTTGAAACACATAGATTCCCCCCGGCCTTTGCGGTCACACAAATCTGTCAATGGAGGAGAAACAGTTGCCAATGAACCTTTACATTCTCTTGCCAAGTCCAAGAAAAAACCTTGGGACTCACCACGGCTCTCTTATGATGAAACATTCAAATCAGCCACAAAGCATAAGGAACTTCCAAGACTTTCTTTGGACAGCAGAGAAGGGTCCAATAGAGGTTTCAATGAAGGAAACAAGTCTCACAACCAGTTGAAGGGTTCACCGAGATGGTACGGGAGAACCTCCAGCACAATGATTAACCAATTGAAAGAACCAGAAACTTCCAAAAGGTCTTCCAGTGTTGTAGCTAAGTTGATGGGACTTGAAGCCCTCCCTGAGTGTACACAAACTTGTGGGAGTCCAAAGGGAACTTCTAGTAGTTCTACCAAAAAGAATGAGCTCTTGTCAAGATCTTGTACAAGTGATGAAGACAAGCAACACCAAAGATTCACCTTGCCACACTCCAAAAAGGCTGATTCAATCACAAATATGATGCCATATTCACGATTTGCGATAGAATCAACTCCATGGAGGCAACCTGATACGATTCAAAGTTCTCAATTACAAGCTTCCAAGGGAAGTGAATCTGATATAAAAGCCTCAAAGTCCTCTCTCACTGTGTATGGGGAAATTGAGAAAAGGGTAGCAGAACTTGAGTTCAAAAAGTCTGGAAAGGATCTCAGAGCCCTTAAACAGATTCTTGAAGCAATGCAGAGACATAAGTATTCAGTAGACATTGCTAGAGATCAGGCTTCAAATTCTCCATCTAACAATAGGAATAATACTAATCTCAACGAAAGCTCGAAAATACAAAGCCCACGAGTAAGACAAAAAGACACAGCATCTGTAACGGCTGAGATGTCAAATTCAACCCAGGGTAGTAAATTGCCAATTGTCATCATGAAACCAGCAAAAGTTACTAGGAAACCCAATAATCTGTCGTCTACAGAATTGTCAATTCATGGTAAATCTGGTCTCAGCAAGTGTTCCCCTAGTAATCCCACAAATGGAAGATTGGTTGACAAGCAAACTGCTAGAGGTATCAGTTCATCAACAAAAAATATCAAGGATCCTTTTGGACAAGAAGTTTGTTCATCCGATAAAAACAACATGAGATCTTCAAAGTTGATGCAATCCATGAAAGTTTCTCAAGACAGCAATGGAGAATGCACCCCCAACTATGGTTATATAAATGTGACTGGGAGCCCCAGACCTCAAAAGAAGTTTGGTTTGGAGAGGTGTTCGCGACCAACCAGTCCATCATCAGATTCCAGAATTAACCGAAGAGAGCACAATAGGCAACCTGTGGAATTGTCTTCTCCAAGTTCAACACCAAGACATAAGTTCTCCACTTTGCAGCAAAGAAATGAACGCTTCAGTGAGATCAGCTGTCACTGGAGGGATTTTAAGCATCATGTGAACATCATTTCGGATTTTGATGACAAAAGCAGCTCGGCCAGTCATAGTGACATTGAAGTCATTCGCATTGATCAATCTGGAAAGATCATTAGCTCCTCCATCCAGCTGAGTGGCATGAGTCAAAATAATGCATTTGAAGAGTTGAGGAAGGCTGAGACCATGATTACTGCAGAACAACCAAGCCCTGTGTCTGTTCTTGATGCTGCATTCTATAAGGATGACCCACCATCTCCAGTGAAAAATAAATCAGACATCTCAAAAAATTTAGGTGAAGCTCTAAGCACTGATGAGGATAGTGAAGAGAGCTCAGTGGATCTTCTTCAAGAAATTGACTGGATTGACGAGAAACTCTTCAATTTCAATAACAATAGGGATCCTGACCATAAGTATATAGCGAAAATACTGTTAGCATCAGGTCTGCTCAGTGGCCGCAGCTATAGCCAGATATTTCATTCGCCGGGTCATTTGATTAATCCAAAGTTGTTCTTTGCACTTGAACAAATGAAGACAAAGAGGCCTTTGAACATTGAAGGCAGTGCCAAGAAGATTCCCAGGAATATTAACCCTGAGCAAATGCAAAGAAAACTCATATTTGATGTTGTCAATGACATTTTAGTTCAAAAGCTGATATTGGATAGTTCTTCTGCATTGTGGTGCCAACCAAATGAGTTAGCAGGCACAACATTAAAAGGGAAGCAGCTTTTGGATGAGCTATGCACAGAAATTGATCAGTTGCAACCTCAAAATAGGAATGTCAGTTTAGTTCACGAGGAGGAGAATTTGAAGCATCACCAAGCAATTTGGACTAACTGCTGCAATGAGATGCCAAATATTGTGTTGGATGTTGAACGTTTGATCTTTAAAGATTTGATAACTGAGGTTGTGAGAGGTGAAGTAGCAAACCATCCTGGTACACATTGCAGGCAACTGGTGTTTTACAAGTAG 2925 0.4116 MSGKALKSLKDENPDLQKQIGCITGFFQLFDRHRFLTGQRSATYVQHRPTSGGSSNEIKELNGTMQKAKAKNLKTAREKQQFSTESSITSLSSSSCSSSMSSHEFNKTIQIQSPSRNQIRIPENTNSKAAKKQPHKPHQQSLHFHHIVNDSMHKETRRLSVKTGAKEEKKGQTNALKHIDSPRPLRSHKSVNGGETVANEPLHSLAKSKKKPWDSPRLSYDETFKSATKHKELPRLSLDSREGSNRGFNEGNKSHNQLKGSPRWYGRTSSTMINQLKEPETSKRSSSVVAKLMGLEALPECTQTCGSPKGTSSSSTKKNELLSRSCTSDEDKQHQRFTLPHSKKADSITNMMPYSRFAIESTPWRQPDTIQSSQLQASKGSESDIKASKSSLTVYGEIEKRVAELEFKKSGKDLRALKQILEAMQRHKYSVDIARDQASNSPSNNRNNTNLNESSKIQSPRVRQKDTASVTAEMSNSTQGSKLPIVIMKPAKVTRKPNNLSSTELSIHGKSGLSKCSPSNPTNGRLVDKQTARGISSSTKNIKDPFGQEVCSSDKNNMRSSKLMQSMKVSQDSNGECTPNYGYINVTGSPRPQKKFGLERCSRPTSPSSDSRINRREHNRQPVELSSPSSTPRHKFSTLQQRNERFSEISCHWRDFKHHVNIISDFDDKSSSASHSDIEVIRIDQSGKIISSSIQLSGMSQNNAFEELRKAETMITAEQPSPVSVLDAAFYKDDPPSPVKNKSDISKNLGEALSTDEDSEESSVDLLQEIDWIDEKLFNFNNNRDPDHKYIAKILLASGLLSGRSYSQIFHSPGHLINPKLFFALEQMKTKRPLNIEGSAKKIPRNINPEQMQRKLIFDVVNDILVQKLILDSSSALWCQPNELAGTTLKGKQLLDELCTEIDQLQPQNRNVSLVHEEENLKHHQAIWTNCCNEMPNIVLDVERLIFKDLITEVVRGEVANHPGTHCRQLVFYK* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2196 974 MobiDBLite consensus disorder prediction 496 587 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 242 266 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 302 336 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 304 322 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 70 120 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 162 185 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 360 384 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 204 218 - -
Gso18g2196 974 PANTHER LONGIFOLIA PROTEIN 1 766 - -
Gso18g2196 974 PANTHER LONGIFOLIA PROTEIN 764 973 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 623 640 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 79 120 - -
Gso18g2196 974 PANTHER LONGIFOLIA PROTEIN 1 766 IPR033334 GO:0051513
Gso18g2196 974 PANTHER LONGIFOLIA PROTEIN 764 973 IPR033334 GO:0051513
Gso18g2196 974 MobiDBLite consensus disorder prediction 496 640 - -
Gso18g2196 974 Coils Coil 58 78 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 435 483 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 362 384 - -
Gso18g2196 974 MobiDBLite consensus disorder prediction 162 218 - -
Gso18g2196 974 Pfam Domain of unknown function (DUF4378) 787 953 IPR025486 -
Gso18g2196 974 MobiDBLite consensus disorder prediction 231 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2196 Gso-Chr18 54940978 54946821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2196 1 963 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 31.471 3.67e-82 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2196 - - gmx:102660880 1852.8