Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2193 ATGAATAAAGTGGTAGAAGTTTTGAGTGTAGCACCAATTTTGGAATCAGAAGAGTTACCAACTCAAACATCGCTTCCCCTCACCTTCTTTGATATACTATGGTTAAGGTTACCACCTGTTCAACGCATCTTCTTCTATGAATTTCCTCACCCAACCCATCTCTTCTTTGATACCCTTCTTCCCAAACTCAAACACTCTCTTTCTCTTGCACTTGCCCACTTTTACCCTCTTGCTGGACACCTCATCTGGCCCCTTCACTCCGCCAAACCCATCATCAATTACAACACTGGTGACACTCTTTCACTCATTGTAGCTGAATCTGAAGCTGATTTCAACCATTTAGCAGGCACAGATCTTTATGAAGCTAAAGAAATTCACAATCTTTTACCCCACTTGACCATATCCCATGAAAAAGCTACTCTTTTGGCCCTGCAAGTTACCCTATTTCCAAACTCTGGATTTTCCATTGGAATAACCTCACACCATGCTGTTCTTGATGGCAGAACTTCAACATCGTTTATGAAATCCTGGGCTTATCTTTGTAGAGAATCACAATCACCCACTTCTTTACCACCAGAACTTTGTCCTTTTTTTGACAGGGAAGTAGTCAAAGACCCCAATGAACTAGAAGCAAAATATGTCAGTGATTGGTTGAAGCATGGTGGACCCAACAACAGAAGCCTCATGGTTTGGGATCTGCCAGTTCCAGAAGAAGCAACCAGGGGCTTATTTCAACTGCCACGTTCAGCTATTGAAAAAATCAAGCAAATTGTGGTTATGTCCAAGAAGAAAGGGAATAACAACACCAACCTTCACTTGTCAACGTTTGTGTTATCTATTGCATATGCGTTGGTTTGCAGAGTGAGAGCAGAAGAAGTAAAAAGTAAAAGGGTTGTTTTGGGTGTGAGCGTTGATTGCAGGCGTTGGTTGGAGCCACCTCTTCCTCCAACATATTTTGGAAACTGTGTTGGTGGCAGAGTTGTGATTTTTGAAACAAGAGGATTGTTGGGGGATGAAGGAGTGCTTGTAGCTGTGGAAGCACTGAGTGAAGCTTTGGAAACTCTGAAGGATGGTGTGCTGAATGGAGCAGAAAATTGGTCTTCGATGCTGTTTGATGGTCTCGCCACTGATGACAAGACAATTGGCGCTGCTGGGTCACCGAGGTTTGAGGTTTATAGTAGTGACTTTGGTTGGGGAAGACCAAAGAAAGTGGAGATGGTGTCTATTGACAGAACTGCAGCGTTTAGTCTTTCAGAGAGCAAAAATGGAGATGGAATTGAGATTGGTTTTGTGTCCAAGAAAACAACAATGGAGACCTTTGCTTCTCTCTTTGTCAATGGCCTTCAATCTTGA 1353 0.4279 MNKVVEVLSVAPILESEELPTQTSLPLTFFDILWLRLPPVQRIFFYEFPHPTHLFFDTLLPKLKHSLSLALAHFYPLAGHLIWPLHSAKPIINYNTGDTLSLIVAESEADFNHLAGTDLYEAKEIHNLLPHLTISHEKATLLALQVTLFPNSGFSIGITSHHAVLDGRTSTSFMKSWAYLCRESQSPTSLPPELCPFFDREVVKDPNELEAKYVSDWLKHGGPNNRSLMVWDLPVPEEATRGLFQLPRSAIEKIKQIVVMSKKKGNNNTNLHLSTFVLSIAYALVCRVRAEEVKSKRVVLGVSVDCRRWLEPPLPPTYFGNCVGGRVVIFETRGLLGDEGVLVAVEALSEALETLKDGVLNGAENWSSMLFDGLATDDKTIGAAGSPRFEVYSSDFGWGRPKKVEMVSIDRTAAFSLSESKNGDGIEIGFVSKKTTMETFASLFVNGLQS* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2193 450 Gene3D - 235 450 IPR023213 -
Gso18g2193 450 PANTHER - 3 450 - -
Gso18g2193 450 SUPERFAMILY CoA-dependent acyltransferases 272 449 - -
Gso18g2193 450 Gene3D - 2 227 IPR023213 -
Gso18g2193 450 Pfam Transferase family 5 442 - -
Gso18g2193 450 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 3 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2193 Gso-Chr18 54916032 54917806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2193 43 401 Monolignol Biosynthesis Gene Families AT5G48930 25.606 4.25e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2193 - - gmx:100805184 904.434