Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2190 ATGGCTTCTCACAACATCAAAATCCACGACCACTTAAGGGTTTCCCCTCCCTCAGCAACAGAAATATCCCTCTCTCTCACTTTCTTCGACCTGTTCTGGCTCAGGTTCCACCCCGTGGAACGCATCTTCTTCTACACCCTCCCTACACCCCATTCAAATCCATCCATTTTCTATTCCAAACTTGTTCCAAAGCTCAAAACATCTCTCTCTCGCACTCTCCAACACTTCCCCCCTCTCGCCGGCAACGTCGTTTGGCCTGATAACACCCCAAACCCCACCGTCCAATACACCCCAGGGGACTCCGTTTCACTTGTGGTTGCTGAATCCGAAGCTGATTTCAACCACGTGTTAGATAACTCACCTCACGAAGCATCAGAGTTACGTTGTTTAGTACCCCACTTGGATTCATCGGATTCTCATGCTTCTGTTGTCTCTTTCCAAATCACTCTGTTCCCTAACAGAGGCTTCAGCATAGGAATCAGCACCCACCATGCCGTCCTTGATGGAAAATCTTCAACTATTTTCATCAAGGCTTGGGCTTCTCTATGCAAAACGTACAATGATGATGAGTCTTCAGAGTCATCATCACCATCTTTGGCTCCAGAGTTGAAGCCTTTCTTTGATAGAACAGCCATCAAAGACCCAAGTGAGATAGGACTTAACTTCACTGTCAATTGGACTGAGATCTTAACCAAAATTTTCCCCAATGAAAACAGCGACGGGAGATGCTTGAAGCTCCTACCTTTCCCTCCAAGACTCGAGGATCATGTTCGAGCCTCGTTCGCGCTCACAGGAGCAGATTTGGAGAAGCTAAGGAAAAGGGTGTTGTCCAAATGGGACATCGTTGATAGAGGAGCAGAATCAGAGCCACCTAGGTTGTCATCTTTCGTTCTCACATGTGCTTATGCGCTAGCTTGCATTGCTAAGGCCATTCATGGAGTTGAAAAGGAGAAAGAGAAATTTGCTTTTGCGTTCACAGTGGATTGCAGGGCGAGGTTGGAGCCTCCAATCCATGATAATTATTTTGGCAATTGTGTGTGGGGGCATGTGGTGGATGCTGAACCATTGGACTTCATAAAGGAAGAAGCTTTTGCTATTGTTGCAAAGAGTATTCATAGTAAAATAAAGATGATATTAGATGAGGGGATTTTTCATGGGATGGAGAGTGCGTTTTCTAGATATGAGTCTTTGGGAAAAGACGGAGTTGAAATCATGGGAATTGCAGGGTCTAACCGGTTTGGAGTTTATGGAACTGATTTTGGTTGGGGAAAGCCTGCTAAGGTGGAGATAGCATCGGTGGATAGAGCCTTAACCATTGGGTTTGCAGAGAGCAAGGATGGGAATGATGGTGTTCAAGTTGGGCTCGTGCTGAAGAAACATGTCATGGATCTCTTTTGTACTTTGTTTCGTCAAGGAATGTTAGATGATTGA 1431 0.4556 MASHNIKIHDHLRVSPPSATEISLSLTFFDLFWLRFHPVERIFFYTLPTPHSNPSIFYSKLVPKLKTSLSRTLQHFPPLAGNVVWPDNTPNPTVQYTPGDSVSLVVAESEADFNHVLDNSPHEASELRCLVPHLDSSDSHASVVSFQITLFPNRGFSIGISTHHAVLDGKSSTIFIKAWASLCKTYNDDESSESSSPSLAPELKPFFDRTAIKDPSEIGLNFTVNWTEILTKIFPNENSDGRCLKLLPFPPRLEDHVRASFALTGADLEKLRKRVLSKWDIVDRGAESEPPRLSSFVLTCAYALACIAKAIHGVEKEKEKFAFAFTVDCRARLEPPIHDNYFGNCVWGHVVDAEPLDFIKEEAFAIVAKSIHSKIKMILDEGIFHGMESAFSRYESLGKDGVEIMGIAGSNRFGVYGTDFGWGKPAKVEIASVDRALTIGFAESKDGNDGVQVGLVLKKHVMDLFCTLFRQGMLDD* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2190 476 Pfam Transferase family 19 465 - -
Gso18g2190 476 PANTHER - 1 476 - -
Gso18g2190 476 Gene3D - 253 474 IPR023213 -
Gso18g2190 476 Gene3D - 6 235 IPR023213 -
Gso18g2190 476 SUPERFAMILY CoA-dependent acyltransferases 292 444 - -
Gso18g2190 476 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 476 - -
Gso18g2190 476 SUPERFAMILY CoA-dependent acyltransferases 62 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2190 Gso-Chr18 54902714 54904334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2190 6 465 Monolignol Biosynthesis Gene Families AT5G48930 25.263 1.27e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2190 - - gmx:100814826 954.896