Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2189 ATGGCTTCTTCCGACAAGTCCATCAAGATCCATGAGCACTGCCTCGTTCCTCCTCCCTCTGCAGCTGCAACCCCTTTCTCTGTCCCTCTAACCTTCTTTGACCTTCATTGGCTAAGGTTTCATCCAGTTGAGCGCATCTTCTTCTACTCTCTTCCTCTTCCTCACTCCGACCATTCTTCTTTCTTTGACAAAGTGGTTCCAAAGCTCAAAACCTCATTGTCTCATACCCTCCAACACTTTCTCCCTTTAGCCGGCAACATCGTTTGGCCTTCTGATTCACCCAAACCCATCATCCAATTCAACCCTGGTGATGGTGTTTCGTTGGTCCTAGCACAGTGTGATGATGCACTATTCAATCACATGTTGGACAATTCACCCCGTGGCGCCACAGAATCTCACACTTTGGTACCCCACTTGGAGTCATCAGATTCTCTTGCCTCAGTTATGTCCTTGCAGATAACGCTGTTTCCAAACAAGGGCTTTTGCATAGCCATAAGCTCTCACCATGCTGTTCTTGATGGAAAATCTTCAACCATGTTCATCAAGGCTTGGGCATATGCATGTAAATCCGGTGAAGAGGAATCACCACCATCTTTGGTTCCGGAATATTTAGAGCCTTTATTTGATAGAGATATCATCAAAGATCCAACAGGTCTTGAAAGTGTGTTCATAAATAACTGGACACAAATCGCATCTCAAATGAACCCTTCTCACACCAGCAACGGGCGAAGCTTAAAGACTGTGCCACAACCAATCAAGGAAAACTCAGTTCGAGCCACGTTCGAGCTCGCACGAGGAGATTTGGAGAAGATAAAGAAAAGGGTGTTATCCAAGTGGGAGTTAGTGGAGGAATTAGCAGAACCAGTTTTAGCTTCTTCAAAGCCAACTACTTTGTCTACCTTTGTCACTACCTTAGCATATGTGTCTGTCTGCATTGCTAAAGCCATTCATGAAGCCCAAAATGTACAGAAGTTCGTTCTTGGGTTCACTGTTGATTACAGGGCTCGGTTAGAACCTCCAATCCCTGAGAACTACTTTGGCAATTGCGTGGCTTCTCATATGGTGGATACACAGCCACATGACTTCATAAAAGATGATGGGGTGGCCATTGTTGCTAAGAGGATTTGGAGTAAAATAAAAACGTTAGATAAGGGAGCTCTAAATGGACTGGATACAATTTTCTCTAGGTTTATGACTATGAGAAGTGAGGGAACTATGGCAATTGGAGTTGCGGGGTCGAACCGATTTGGTGTTTATGAAACTGATTTTGGTTGGGGAAGGCCTTCCAAGGTGGAGATAACATCCATAGATAGAGGTTTAAACATTGGCTTGGCAGAGAGCAAGGATGGGAGAGGTGGTGTTGAAGTGGGGCTTGCTCTAAACAAACATGTGATGGATCTCTTTCATACTATTTTTCATGCAGGATTAAGTTTTGACTAA 1440 0.4431 MASSDKSIKIHEHCLVPPPSAAATPFSVPLTFFDLHWLRFHPVERIFFYSLPLPHSDHSSFFDKVVPKLKTSLSHTLQHFLPLAGNIVWPSDSPKPIIQFNPGDGVSLVLAQCDDALFNHMLDNSPRGATESHTLVPHLESSDSLASVMSLQITLFPNKGFCIAISSHHAVLDGKSSTMFIKAWAYACKSGEEESPPSLVPEYLEPLFDRDIIKDPTGLESVFINNWTQIASQMNPSHTSNGRSLKTVPQPIKENSVRATFELARGDLEKIKKRVLSKWELVEELAEPVLASSKPTTLSTFVTTLAYVSVCIAKAIHEAQNVQKFVLGFTVDYRARLEPPIPENYFGNCVASHMVDTQPHDFIKDDGVAIVAKRIWSKIKTLDKGALNGLDTIFSRFMTMRSEGTMAIGVAGSNRFGVYETDFGWGRPSKVEITSIDRGLNIGLAESKDGRGGVEVGLALNKHVMDLFHTIFHAGLSFD* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2189 479 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 5 477 - -
Gso18g2189 479 Gene3D - 253 479 IPR023213 -
Gso18g2189 479 Gene3D - 7 240 IPR023213 -
Gso18g2189 479 Pfam Transferase family 18 470 - -
Gso18g2189 479 PANTHER - 5 477 - -
Gso18g2189 479 SUPERFAMILY CoA-dependent acyltransferases 281 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2189 Gso-Chr18 54897142 54899325 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2189 8 469 Monolignol Biosynthesis Gene Families AT5G48930 24.738 6.70e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2189 - - gmx:100813762 962.6