Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2187 ATGGCTTCTTCAATCAATGGCCGTAATGCAAGTGAGATCTTTCAAGGTCAAACTCTCTTGTACAAACACTTGTATGCCTTCATAGACTCTATGTGTCTCAAATGCATAGTTGAGCTTGGAATACCAGACATAATCCACAACCATGGCCAACCCATTACTCTTCCTGAGTTGGTGTCAATTCTACAAATTCCACCAGCTAAAGTTAGTCAAGTGCAAAGTCTCATGCGCTACCTGGCACACAATGGATTCTTTGAAAGAGTAAGAATCCATGAAAAAGAATCATATGCTCTCACTGCTGCTTCAGAGCTACTTGTCAAAAGCTGTGAGCTTAGTTTAGCTCCAATGATTGAGTTTGTTCTTGACCCAACTTTGTCAAATTCATTCCATCAATTGAAAAAGTGGGTTTCTGAGAAAGATCTCACATTATTTGACATCTCCTTAGGATCACATTTGTGGGACTTTCTTAATAAAAACCCTGCACTTAACAAGTCATTCAATGAGGCAATGGCTAGTGATTCTCAGATGATGAACTTGGCGTTGAGAGATTGCAATTGGGTCTTTCAAGGACTGGAATTCATTGTGGATGTTGGTGGTGGAACTGGAACCACAGCCAAGATTATATGTGAAGCATTTCCTAACTTGAAATGCATTGTGTTTGACCGTCCACAAGTTATAGAGAACTTGTCAGGAAGCAACAATTTGACATATGTTGGTGGGGACATGTTCAAATCTATTCCTAAGGCTGATGTAATTCTGCTTAAGTGGATTCTACATAATTGGACTGATAAGGATTGCATAAAGATATTGAAGAACTGCAAAGAAGCTATTTCAAATAATGGCAAAAGAGGAAAAGTGATTATCATAGATGTTGTGATAAACGAAAAAGAAGATGAGCACAAAGTTACGGAACTAAAGCTCGTTATGGATATAACCATGGCATGTGTTAATGGAAAAGAGAGAAATGAAGAAGAATGGAAGAAACTCTTCATGGAAGCAGGGTTCCAAGACTACAAAATATTTCCCTTGACCAAATATTTGTCTGTTATTGAGATCTATCCTTAG 1062 0.3814 MASSINGRNASEIFQGQTLLYKHLYAFIDSMCLKCIVELGIPDIIHNHGQPITLPELVSILQIPPAKVSQVQSLMRYLAHNGFFERVRIHEKESYALTAASELLVKSCELSLAPMIEFVLDPTLSNSFHQLKKWVSEKDLTLFDISLGSHLWDFLNKNPALNKSFNEAMASDSQMMNLALRDCNWVFQGLEFIVDVGGGTGTTAKIICEAFPNLKCIVFDRPQVIENLSGSNNLTYVGGDMFKSIPKADVILLKWILHNWTDKDCIKILKNCKEAISNNGKRGKVIIIDVVINEKEDEHKVTELKLVMDITMACVNGKERNEEEWKKLFMEAGFQDYKIFPLTKYLSVIEIYP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2187 353 Pfam O-methyltransferase domain 128 335 IPR001077 GO:0008171
Gso18g2187 353 CDD AdoMet_MTases 193 292 - -
Gso18g2187 353 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Gso18g2187 353 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 110 351 IPR029063 -
Gso18g2187 353 Gene3D Vaccinia Virus protein VP39 105 353 IPR029063 -
Gso18g2187 353 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 353 IPR016461 GO:0008168
Gso18g2187 353 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 352 - -
Gso18g2187 353 PIRSF O-mtase 1 353 IPR016461 GO:0008168
Gso18g2187 353 SUPERFAMILY "Winged helix" DNA-binding domain 11 107 IPR036390 -
Gso18g2187 353 Gene3D - 1 104 IPR036388 -
Gso18g2187 353 PANTHER O-METHYLTRANSFERASE 2 352 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2187 Gso-Chr18 54868806 54870238 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2187 26 339 Monolignol Biosynthesis Gene Families AT5G54160 32.326 7.26e-48 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2187 K22588 K13262 gmx:100813225 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2187 18 54868806 54870238 Gso8g2034 8 21408069 21409779 GST