Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2186 ATGGCTTCTTCAATCAATGGCCGTAATGCAAGTGAGATCTTTCAAGGTCAAACTCTCTTGTACAAACACTTGTTTGCCCATGTAGATTCTAAGTGTCTCAAATGCATTGTTGAGCTTGGAATACCAGACATAATCCACAACCATGGCCAACCCATTACTCTTCCTGAGTTGGCGTCAATTCTACAAATTCCACCAGCTAAAGTTAGTCAAGTGCAAAGTCTCATGCGCTACCTGGCACACAATGGATTCTTTGAAAGAGTAACAATCCATGAAAAAGAAGCATATGCTCTCACTGCTGCTTCAGAGCTACTAGTCAAAAGCAGTGAGCTTAGTTTAGCTCCAATGGTTGAGTATATTCTTGACACAACTATTTCAGGTTCATTTCATCAGTTGAAGAAGTGGGTTCATGAGGAAGATCTCACACTATTTGAGATTTCCTTAGGATCACATTTGTGGGACTTTCTTAATAGAAACCCTGCATATAACAAGTCATTCAATGAGGCAATGGCTAGTGATTCTCAGATGTTGAACTTGGCGTTGAGAGATTGCAAGTTGGTGTTTGAGGGACTGGAATCCATTGTGGATGTTGGTGGTGGAACTGGAGCCACTGCCAAGATTATCTGTGAAGCATTTCCTGACTTGAAATGCATTGTGTTTGACCGTCCGCAGGTTGTGGAGAACTTGTCAGGAAGCAACAATTTGACATATGTTGGAGGGGACATGTTCAAATCTATTCCCAAGGCCTGTGCAGTTCTATTTAAGATGATTTTACATAATTGGAGTGACGAAGATTGCAGGAAGATATTAGAAAATTGTAAAGAAGCTATTTCGAGTAAAAGCAAAACAGGAAAAGTAATTGTCATAGATGTTGTGATAAACGAAAAGAAAGATGAGCATGAAATTACAAGACTAAAGCTTCTTATGGATCTAAACATGGCATGTCTTCTTAATGGAAAGGAAAGAAGAGAAGAAGATTGGAAGAAACTCTTCGTGGAAGCAGGGTTCCAAAGCTACAAAATATCTCCTTTGACAGGATATTTGTCTCTTATTGAGATCTATCCTTAG 1065 0.3944 MASSINGRNASEIFQGQTLLYKHLFAHVDSKCLKCIVELGIPDIIHNHGQPITLPELASILQIPPAKVSQVQSLMRYLAHNGFFERVTIHEKEAYALTAASELLVKSSELSLAPMVEYILDTTISGSFHQLKKWVHEEDLTLFEISLGSHLWDFLNRNPAYNKSFNEAMASDSQMLNLALRDCKLVFEGLESIVDVGGGTGATAKIICEAFPDLKCIVFDRPQVVENLSGSNNLTYVGGDMFKSIPKACAVLFKMILHNWSDEDCRKILENCKEAISSKSKTGKVIVIDVVINEKKDEHEITRLKLLMDLNMACLLNGKERREEDWKKLFVEAGFQSYKISPLTGYLSLIEIYP* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2186 354 PANTHER O-METHYLTRANSFERASE 2 353 IPR016461 GO:0008168
Gso18g2186 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 354 IPR016461 GO:0008168
Gso18g2186 354 SUPERFAMILY "Winged helix" DNA-binding domain 11 108 IPR036390 -
Gso18g2186 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Gso18g2186 354 CDD AdoMet_MTases 193 292 - -
Gso18g2186 354 Gene3D Vaccinia Virus protein VP39 105 354 IPR029063 -
Gso18g2186 354 Pfam O-methyltransferase domain 128 336 IPR001077 GO:0008171
Gso18g2186 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 352 IPR029063 -
Gso18g2186 354 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Gso18g2186 354 Gene3D - 1 104 IPR036388 -
Gso18g2186 354 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2186 Gso-Chr18 54861594 54863426 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2186 26 352 Monolignol Biosynthesis Gene Families AT5G54160 31.487 1.97e-43 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2186 K22588 K13262 gmx:100812688 702.205