Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2184 ATGGCTTCAAATAATGGCCGTAAAGCAAGTGAGATCTTTCAAGGTCAACTTCTCTTATACAGACACATGTATGCTCATGTAGATTCTATGTTTCTTAAATGTATCGTTGAGCTTGGAATACCAAACATAATCCACAACCACGGTCAACCCATTACTCTTCCAAAATTGGTGTCAATTCTACAAGTTCCACCAAATAAAGTTAGTGGCTTGCAGAGTCTCATGCGTTATCTAGCACACAATGGATTCTTTGAGATAGTCACAATCCATGACAACTTGGAAGAAAAGGAAGCATATGCTCTCACTGCTGCATCAGAGCTTCTTGTCAAAGGCAGTGACCTTTGTTTAGCACCAATAGTTGAGTGTTTTCTTGACCCAACTTTTTCAAGTTCATGGCATCAAATGAAGAAGTGGATTTATGAGGATGATCTCACACTCTTTGGTATCTCATTAGGGTCACACTTGTGGGACTTTCTCAATAAAAGCCCTACACATAACAAATCATTCAATGAGGCAATGGCTAGTGATTCTCAGATGATGAACTTGGCGTTGAGAGATTGCAATTGGGTCTTTGAAGGACTGGAGACCATTGTGGATGTTGGTGGTGGAACTGGAATCACAGCCAAGATTATCTGTGAGGCATTTCCTAAGTTGAAATGCATAGTGTTGGAACGTCCACATGTTGTAGATCAGAACTTGTCAGGATGCAACAATTTGAAATATGTAGTTGGGGACATGTTTAAATCTATTCCCAAGGCTGATGCAGTTCTACTTAAGTGGATCTTACATAATTGGAATGACAACGATTGCAGAAAGATATTAGAAAATTGTAAAGAAGCTATTATTTCGAGTAAATGCAAAAGAGGAAAAGTAATTGTCATAGATGTTGTGATAAACGAAAATCAAGATGAGCATGAAGTTACTAGACTAAAGCTCCTTATGAATGTACACATGGCGTGTCTTATTAATGGAAAAGAGAGAAGTGAAGAAGAATGGAAGAAACTTTTCGTGGAAGCAGGATTCCAGGGCTACAAAATATCTCCTTTGACAGGACATTTGTCTCTTATTGAGATCTATCCTTAA 1080 0.3833 MASNNGRKASEIFQGQLLLYRHMYAHVDSMFLKCIVELGIPNIIHNHGQPITLPKLVSILQVPPNKVSGLQSLMRYLAHNGFFEIVTIHDNLEEKEAYALTAASELLVKGSDLCLAPIVECFLDPTFSSSWHQMKKWIYEDDLTLFGISLGSHLWDFLNKSPTHNKSFNEAMASDSQMMNLALRDCNWVFEGLETIVDVGGGTGITAKIICEAFPKLKCIVLERPHVVDQNLSGCNNLKYVVGDMFKSIPKADAVLLKWILHNWNDNDCRKILENCKEAIISSKCKRGKVIVIDVVINENQDEHEVTRLKLLMNVHMACLINGKERSEEEWKKLFVEAGFQGYKISPLTGHLSLIEIYP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2184 359 PANTHER O-METHYLTRANSFERASE 2 358 IPR016461 GO:0008168
Gso18g2184 359 PIRSF O-mtase 1 359 IPR016461 GO:0008168
Gso18g2184 359 Gene3D Vaccinia Virus protein VP39 108 359 IPR029063 -
Gso18g2184 359 CDD AdoMet_MTases 195 297 - -
Gso18g2184 359 Pfam O-methyltransferase domain 131 341 IPR001077 GO:0008171
Gso18g2184 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 359 IPR016461 GO:0008168
Gso18g2184 359 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Gso18g2184 359 Gene3D - 1 107 IPR036388 -
Gso18g2184 359 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Gso18g2184 359 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 358 - -
Gso18g2184 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 357 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2184 Gso-Chr18 54848787 54851113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2184 14 357 Monolignol Biosynthesis Gene Families AT5G54160 29.859 3.25e-43 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2184 K22588 - gmx:100811609 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2184 18 54848787 54851113 Gso8g2033 8 21391057 21404682 GST