Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2176 ATGGCTGTAGAGGAGTCCGAGCCTGTGATTGGGGAGCTGGAAAGGGAGGAGAATTTGATTGCTGCAGTTAGGCATATTGTGAAGGCATTGGGGCCAAATAAGACCCTTACTAGTGATGCCAAGAAAATTCTGGCAGATCTTGGCACTAGATTGTCCTCCATGTCCATACCTAGTGAGAAGGATGAGGGGAAACAAGGGCAGGGGGAGGATGGTGGTGATGATCATGATGGCAGTGATGATCTTCATGATGATTATGATGATGATGAGGGTGTTAGTGCTATTGAAGAAAGGCTTAATGTGATTCAGGAGAAGATTATGAGATGGGAGGAAGATCAGTCCATGATTTGGGATTTAGGGCCTATGGAAGCATCTGAGTATCTTAATGCTGCTAATGAAGCCCGCCGGTTGATTGAGAAGTTGGAAAGTTTGCATTTGAAGAAAGAGGATCAAGAGTACAAGTGTATGCAGAGGGCTTATAGTGTTCTTCAAACAGCTATGGCGCGGCTTGAAGAAGAATTCAGGAACTTGCTTATCCAGAACAGGCAACGTTTTGAGCCTGAGTATGTCTCTTTTCGCTCCAATGAGGAAGATGCTGCTGATGAGAACTCCATAGTCTCTTTAGGTGACGAATTAGTTGAGGAATCACTTCAAAGAGATAGTGTCAGCAGAGCTTATGAGGAGCATATCATTGATTTGGTTCATCCAGCCGTGATCCCGGATCTCAGGTGTATTGCAAACTTGCTTTTTGCTTCTAATTATGTCCAGGAATGTTCTAATGCTTATATCATTGTCCGGAGGGATGCCTTAGATGAGTGCCTCTTCATTCTTGAAATGGAAAGGCTAAGCATCGAGGATGTCTTGAAAATGGAGTGGGGTACTCTGAATTCAAAAATCAAAAGATGGATTTGGGCTGTGAAAATTTTTGTTAGGGTGTATCTTGCAAGTGAGAGGTGGCTTAGTGACCAGATTTTTGGGGAGGGTGAGCCTGTTGGTCTATCTTGTTTTGTTGATGCATCTAAGGCTTCGATGTTGCAGCTTCTGAATTTCGGTGAAGCCATGTCCATTGGCCCTCACCAACCCGAGAAATTGTTCCGCGTTCTTGACATATATGAGGTTCTACAAGACCTTATGCCAGACATTGATGCTTTGTATTCAGATGAGGTTGGTTCCTCGGTAAAAATTGAATGTCATGAGGTTCTGAAGAGATTAGGCGATTGTGTGAGGGTGACATTTCTTGAATTTGAAAATGCCATTGCAACAAATGTATCATCAACTCCTTTTGTAGGTGGTGGGATACATCCTTTGACCAAATATGTTATGAATTATCTTAGAGCCCTTACCGACTACAGTGACATACTCAATCTGCTTTTGAAGGACCAAGATGAGGATGCCATTTCGCTGTCACCTGACATGAGCCCTGGTACAGAAGAAGATAACAGAAGCCAGGGATCTCCAAGTAGAGTTTCCTCAATGGCCCTCCACTTCCGATCAATTGCTTCAATCTTGGAAAGCAACCTTGAGGAGAAGTCCAAGTTATACAAAGAAGTCTCCTTGCAGCACTTGTTCTTAATGAACAACCTGCATTATATGGCTGAAAAGGTTAAGGGGTCTGAACTCAGGCTCGTACATGGAGATGAATGGATTCGAAAGCGCAACTGGAAGTTTCAGCAGCATGCAATGAAATATGAGAGAGCTAGTTGGAGTTCCATTCTCAACTTGCTTAAGGATGAGGGAGTTTTTGTTCCGGGTATAACTTCGGTCTCAAAAAGTCTTGTTAAAGAGAGGCTGCGAAGCTTCTACCTTGGCTTTGAGGATGTTTACAGGATCCAGACAGCTTGGATTATCCCTGATTTTCAGCTTCGTGAAGATTTGCGGATTTCTATATCTGTCAAAGTAATCCAAGCTTATAGGTCGTTTGTTGGAAGGTTCAGTTCGTACACAAGTGACAAAATCATTAAGTACAGTCCTGATGATTTAGAAAACTACCTTTTGGATTTCTTTGAAGGATCTCAAAAGTTGTTGCAAAATCCTCATAGGAGGTGA 2043 0.4283 MAVEESEPVIGELEREENLIAAVRHIVKALGPNKTLTSDAKKILADLGTRLSSMSIPSEKDEGKQGQGEDGGDDHDGSDDLHDDYDDDEGVSAIEERLNVIQEKIMRWEEDQSMIWDLGPMEASEYLNAANEARRLIEKLESLHLKKEDQEYKCMQRAYSVLQTAMARLEEEFRNLLIQNRQRFEPEYVSFRSNEEDAADENSIVSLGDELVEESLQRDSVSRAYEEHIIDLVHPAVIPDLRCIANLLFASNYVQECSNAYIIVRRDALDECLFILEMERLSIEDVLKMEWGTLNSKIKRWIWAVKIFVRVYLASERWLSDQIFGEGEPVGLSCFVDASKASMLQLLNFGEAMSIGPHQPEKLFRVLDIYEVLQDLMPDIDALYSDEVGSSVKIECHEVLKRLGDCVRVTFLEFENAIATNVSSTPFVGGGIHPLTKYVMNYLRALTDYSDILNLLLKDQDEDAISLSPDMSPGTEEDNRSQGSPSRVSSMALHFRSIASILESNLEEKSKLYKEVSLQHLFLMNNLHYMAEKVKGSELRLVHGDEWIRKRNWKFQQHAMKYERASWSSILNLLKDEGVFVPGITSVSKSLVKERLRSFYLGFEDVYRIQTAWIIPDFQLREDLRISISVKVIQAYRSFVGRFSSYTSDKIIKYSPDDLENYLLDFFEGSQKLLQNPHRR* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2176 680 Coils Coil 91 111 - -
Gso18g2176 680 Coils Coil 123 150 - -
Gso18g2176 680 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 674 IPR004140 GO:0000145|GO:0006887
Gso18g2176 680 MobiDBLite consensus disorder prediction 472 487 - -
Gso18g2176 680 MobiDBLite consensus disorder prediction 73 87 - -
Gso18g2176 680 MobiDBLite consensus disorder prediction 466 487 - -
Gso18g2176 680 Coils Coil 152 179 - -
Gso18g2176 680 Pfam Exo70 exocyst complex subunit 299 664 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso18g2176 680 Gene3D Exocyst complex component Exo70 106 675 - -
Gso18g2176 680 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 22 674 - -
Gso18g2176 680 SUPERFAMILY Cullin repeat-like 111 668 IPR016159 -
Gso18g2176 680 MobiDBLite consensus disorder prediction 52 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2176 Gso-Chr18 54766247 54769108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2176 12 680 EXO70 exocyst subunit family AT3G29400 48.316 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2176 K07195 - gmx:100802534 1283.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2176 18 54766247 54769108 Gso8g2024 8 21224409 21227333 GST