Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2151 ATGCACAGCACCTTCTCCTCTCTCCTTCGTTGGATTAGCAAAAAGTTGCGACGAAGGAATTCAATTAGCAATGGTGACAGTGGCAGCGACAGCTTCCAGAACGGTGCTGCCACAGTTGTGGATGACAATCCATTTAGCAGCGGGGTGGAGTGTTACGCCTGCACGCAAGTAGGTGTGCCGGTGTTTCACTCCACCAGCTGCGACAGTGCCTTCCACCAGTTGCAGTGGGAGGCTTCGGCTGGGTCGTCTCTGGTTCCCATCCAGAGCCGACCCAACAAGGTCCTCGGCTTTCGGACCGTGTCCGGATCAAGTCGGGGGCCGTTCGGGCGGGTTCTGGATCCGAGAAGCAAGCGCGTGCAGAGGTGGAACCGCGCGCTGCTCCTGGCGCGTGGGGTGGCGCTGGCGATAGACCCGCTGTTCTTCTACTCGCTGTCGATAGGAAGGGAGGGGTCGCCGTGCTTGTACATGGACGGAGGGCTGGCGGCGATGGTGACGGTGGCGCGCACGTGCGTGGACGCCGTGCACCTCTTGCACGTGTGGCTGCAGTTCAGGCTGGCGTACGTATCGCGGGAGTCGCTGGTGGTGGGGTGCGGGAAACTCGTGTGGGACGCGCGTGAGATCGCGTCGCATTACCTGCGATCGTTGAAGGGATTCTGGTTCGACGCATTCGTGATCCTCCCAGTCCCCCAGGTTGTGTTTTGGTTGTTAGTGCCAAAATTGCTAAGAGAAGAGAAAATTAAAATCATTATGACAATAATGCTATTGATTTTTTTGTTCCAATTTCTCCCTAAGGTTTACCATAGCATCTGCATGATGAGAAGAATGCAAAAAGTCACAGGCTACATCTTCGGCACCATTTGGTGGGGTTTTGGTCTCAATCTCATAGCTTATTTTATTGCTTCTCATGTTGCTGGAGGGTGCTGGTATGTCCTTGCAATTCAACGTGTTGCGTCGTGCCTCCGGCAGCAGTGTGAGAGAACTAATGGATGCAATCTCTCTGTGTCATGCTCAGAGGAGATATGCTACCAGTCTTTGTTACCAGCTAGCGCGATAGGAGATTCATGTGGTGGAAACTCAACAGTGGTAAGAAAGCCTCTGTGCTTAGATGTTGAAGGACCTTTCAAATATGGGATCTACCAATGGGCACTTCCTGTCATATCCAGCAACTCTTTGGCTGTAAAGATTCTTTATCCCATTTTTTGGGGTTTGATGACCCTCAGCACTTTCGGAAATGATCTTGAACCCACAAGCCACTGGCTAGAAGTGATTTTCAGTATATGCATAGTACTCAGTGGACTATTGCTTTTCACATTATTGATTGGTAACATTCAGGTATTCTTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCATCGCGATTAAGACAGAGAGTTCGCCATTTTGAACGTCAGAGATGGGCAGCAATGGGAGGAGAAGATGAGATGGAAATGATCAAAGACTTGCCAGAGGGGCTGAGGAGGGACATCAAGCGCCATCTTTGCCTCGATCTCATTAGAAAGGTTCCTCTATTCCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAAACCCCTAGTCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGTGATCCTGTACCAAGGATGGTGTTCATCGTCCGAGGGCGCATAAAACGCAACCAAAGCCTTAGCAAAGGCATGGTAGCCTCAAGCATCCTTGAGCCAGGAGGGTTTTTGGGTGACGAGCTGCTTTCATGGTGCCTTCGCAGGCCGTTTATCGATAGACTTCCGGCCTCCTCGGCTACATTTGTGTGTCTTGAATCATCAGAAGCCTTTGGCCTTGATGCCAATCACTTGAGGTACATCACTGATCACTTCCGGTACAAATTTGCGAACGAGAGGCTGAAGAGAACAGCAAGATATTATTCATCCAATTGGAGAACCTGGGCTGCTGTCAACATTCAATTTGCTTGGAGACGTTACAGGCAGAGGACTAAAGGTCCAGTGACCCCTGTAAGGGACACTAATGGAGGCACTGAACGCAGGCTCTTGCAATATGCTGCAATGTTCATGTCAATAAGGCCACATGACCACCTTGAATGA 2145 0.5016 MHSTFSSLLRWISKKLRRRNSISNGDSGSDSFQNGAATVVDDNPFSSGVECYACTQVGVPVFHSTSCDSAFHQLQWEASAGSSLVPIQSRPNKVLGFRTVSGSSRGPFGRVLDPRSKRVQRWNRALLLARGVALAIDPLFFYSLSIGREGSPCLYMDGGLAAMVTVARTCVDAVHLLHVWLQFRLAYVSRESLVVGCGKLVWDAREIASHYLRSLKGFWFDAFVILPVPQVVFWLLVPKLLREEKIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYFIASHVAGGCWYVLAIQRVASCLRQQCERTNGCNLSVSCSEEICYQSLLPASAIGDSCGGNSTVVRKPLCLDVEGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSHWLEVIFSICIVLSGLLLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMEMIKDLPEGLRRDIKRHLCLDLIRKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVRGRIKRNQSLSKGMVASSILEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESSEAFGLDANHLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTKGPVTPVRDTNGGTERRLLQYAAMFMSIRPHDHLE* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2151 714 SUPERFAMILY cAMP-binding domain-like 453 640 IPR018490 -
Gso18g2151 714 CDD CAP_ED 526 636 IPR000595 -
Gso18g2151 714 Gene3D Jelly Rolls 524 642 IPR014710 -
Gso18g2151 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 2-LIKE 53 714 - -
Gso18g2151 714 SMART cnmp_10 526 652 IPR000595 -
Gso18g2151 714 Pfam Ion transport protein 122 444 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso18g2151 714 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 53 714 - -
Gso18g2151 714 Gene3D Helix hairpin bin 452 517 - -
Gso18g2151 714 Gene3D - 153 449 - -
Gso18g2151 714 ProSiteProfiles cAMP/cGMP binding motif profile. 526 636 IPR000595 -
Gso18g2151 714 SUPERFAMILY Voltage-gated potassium channels 113 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2151 Gso-Chr18 54578360 54584207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2151 9 714 Ion Channels AT5G15410 75.900 0.0 1053
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2151 K05391 - gmx:100798823 1398.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2151 18 54578360 54584207 Gso8g1995 8 20646152 20651648 GST