Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2149 ATGAGTTCGTGTTGCTTAGAGAAAGAGAACCATGTGGTGGAAACTGCCACCCCACAAAGAGAAGACACTGATATTATCCTGGATGCCATGGTGCTCGGTTCCAATGTGGTCTTTCCTGCCGCTCTCAACGCTGCAATTGAGCTCAAAGTGTTTGAGATCATTGGGAAGGAAAGCTCAGAAGAGAGTGGTGGATTCATGTCACCCCATGAAATTGCTTCCAAGTTGTTATTACCAACACAACAACACCACTCTGACTTGCCAAATAGGCTTGAGCGTTTGTTGCTCTTGCTTGCTAGCTACTCTCTTCTCACTGTTTCCACTCGCACCGATGAGAATGGTAGCGCCGTGAGAGTTTATGCGGTCTCACCATCGGGTAAATATTTCGTCTATGATAAAAATGGTGGTGGCTATCTTGCTTCATTCACATCATTTCTGTGTCACCCTGCGATGTTAGGAGTATGGTTGAATTTTAAGGAAGCGATTATTGATCCTGAGATTGACCTATTCAAGAAGGTTCATGGAATTTCTAAGTTCGAGTACTTTGGGAAAGAACCAGAACTAAACCACGTATTTAACAAAGCAATGAATGATGTATGCACAACCCATATGAAAAAAATACTTGAAGTATACACAGGATATGAGGGTATATCAACTTTGGTTAATGTAGCAGGTGGAACTGGACAATGTCTCAAATTGATCATCTCCAAATACCCTTCAATTAAGGGAATTAATTTTGACCTCCCACATGTGATTGAAAATTCACCACCCATTCCAGGGGTTGAGCATATTGGGGGAAATATGTTTGAAGGTGTTCCACAAGGTGATGCCATAATGCTAAAGGCCATATGCCATAATTGGTCGGATGAAAAAGCCATAGAACTTTTAAGCAATTGTCACAAAGCTTTGCCACCAAACGGGAAGGTCATTGTTGGGGATCTCATAGTGCCAGAAGATCCAGAACCTACAAATGATTGCAAAATGATTTCAATTCTTGATAACATCATGTTTATTACACCTGGTGGAAGGGAAAGAACTGAGAAACAATTTGAAAGTTTGGGCAAGCGTTCTGGATTTTCTAGGTTTCAAGTTGTTTGTCGGGCTTTCTCTACTATGGCAGTGATGGAATTTTACAAATAA 1137 0.4116 MSSCCLEKENHVVETATPQREDTDIILDAMVLGSNVVFPAALNAAIELKVFEIIGKESSEESGGFMSPHEIASKLLLPTQQHHSDLPNRLERLLLLLASYSLLTVSTRTDENGSAVRVYAVSPSGKYFVYDKNGGGYLASFTSFLCHPAMLGVWLNFKEAIIDPEIDLFKKVHGISKFEYFGKEPELNHVFNKAMNDVCTTHMKKILEVYTGYEGISTLVNVAGGTGQCLKLIISKYPSIKGINFDLPHVIENSPPIPGVEHIGGNMFEGVPQGDAIMLKAICHNWSDEKAIELLSNCHKALPPNGKVIVGDLIVPEDPEPTNDCKMISILDNIMFITPGGRERTEKQFESLGKRSGFSRFQVVCRAFSTMAVMEFYK* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2149 378 SUPERFAMILY "Winged helix" DNA-binding domain 23 132 IPR036390 -
Gso18g2149 378 PIRSF O-mtase 7 378 IPR016461 GO:0008168
Gso18g2149 378 Pfam O-methyltransferase domain 154 359 IPR001077 GO:0008171
Gso18g2149 378 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 137 375 IPR029063 -
Gso18g2149 378 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 378 - -
Gso18g2149 378 Gene3D Vaccinia Virus protein VP39 188 367 IPR029063 -
Gso18g2149 378 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 378 IPR016461 GO:0008168
Gso18g2149 378 Pfam Dimerisation domain 41 98 IPR012967 GO:0046983
Gso18g2149 378 Gene3D - 37 206 IPR036388 -
Gso18g2149 378 PANTHER O-METHYLTRANSFERASE 1 378 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2149 Gso-Chr18 54568637 54570513 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2149 17 368 Monolignol Biosynthesis Gene Families AT5G54160 47.175 1.42e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2149 - - gmx:100798295 738.413