Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2118 ATGTCAGAAAAACTTTCGTACTTGAATGAGCCTTTGCTACACGAGTGGGAGCATCGTGAGTTCGGGCATGCCACAGATGAGGAGAAAGTCATAGCCTCACATCCTTCTACGGAAAATACTGCATCCTTCTTTGGCACCTGCCTTAATGGACTCAATGCAATATCAGGTGTTGGCATACTCTCAGTTCCATATGCTCTTGCATCTGGGGGCTGGTTAAGCTTGGTTCTTCTGTTTGCTATTGCCACTACAGCGTTTTACACAGGCATGTTGATTAAAAGATGCATGGATAAGTATTCGAACATTAGAACCTACCCTGATATAGGTGAACTTGCATTTGGAAAGACAGGAAGGTTAATAGTATCAGTGTCCATGTACACCGAGCTCTACTTAGTTTCAATAGGGTTCTTGATTCTTGAAGGAGATAACTTGAGTAACTTATTCCCCATTGGAGAGGTTCAGATAGCTGGCTTAGCAATTGGTGGGAAGCAATTCTTTGTGATAGTGGTTTCTCTTATCATCTTGCCCACAGTTTGGTTGGATAACTTAAGTCTACTTTCTTATGTATCCGCAAGTGGAGTGTTTGCTTCTGCTTTCATCATCCTCTCTATTTCATGGACTGCAACATTCGATGGAGTTGGTTTTCATCAAAAGGGAACTTCTGTTAATTGGAACGGAATCCCCACAGCTGTTAGCTTATATGCCTTTTGTTATTGTGCACATCCTGTCTTTCCTACCTTGTACAATTCCATGACAAACAAACACCAGTTCTCTAATGTCCTACTTCTATGCTTTCTCTTAACCACTGTGGGTTATGCATCCATGGCTATAATTGGTTATCTAATGTTTGGTGCTGACGTTGAATCACAAATAACATTAAACCTGCCACTGAACAAAGTAAGCTCAAAATTAGCAATATATATTACCTTGGTCAATCCCATATCCAAGTATGCTTTGATGGCAACTCCAATTACCAATGCTTTGAAAGACTTGCTTCCAAGTACATACAAGAATAGAGTGACCAACATCTTAGTGAGCACTGTCATGGTAATTGGTACTACCATTGTTGCCCTTGTTGTTCCTTTCTATGGCTATCTCATGTCCCTGGTTGGAGCGTTTCTAAGTGTCACGGCCTCTATTTTGCTTCCATGCTTCTGCTACTTGAAGATTTCAGGCAGTTACAGGAGATTTGAGTGTGAGACAGTAATCATAGTAATAATAATAATACCAGCTATAGTAATGGGAATATCAGGGAGCTACAACTCTGTCATGGAAATAGTCCACCAATTGTAA 1290 0.4062 MSEKLSYLNEPLLHEWEHREFGHATDEEKVIASHPSTENTASFFGTCLNGLNAISGVGILSVPYALASGGWLSLVLLFAIATTAFYTGMLIKRCMDKYSNIRTYPDIGELAFGKTGRLIVSVSMYTELYLVSIGFLILEGDNLSNLFPIGEVQIAGLAIGGKQFFVIVVSLIILPTVWLDNLSLLSYVSASGVFASAFIILSISWTATFDGVGFHQKGTSVNWNGIPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLLCFLLTTVGYASMAIIGYLMFGADVESQITLNLPLNKVSSKLAIYITLVNPISKYALMATPITNALKDLLPSTYKNRVTNILVSTVMVIGTTIVALVVPFYGYLMSLVGAFLSVTASILLPCFCYLKISGSYRRFECETVIIVIIIIPAIVMGISGSYNSVMEIVHQL* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2118 429 PANTHER AMINO ACID TRANSPORTER AVT1J 36 426 - -
Gso18g2118 429 PANTHER OS05G0424000 PROTEIN-RELATED 36 426 - -
Gso18g2118 429 Pfam Transmembrane amino acid transporter protein 40 417 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2118 Gso-Chr18 54246019 54247810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2118 27 426 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.354 4.92e-171 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2118 K15015 - gmx:100786627 832.787