Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2106 ATGGCAGTGGAAAATATCAAAGTCCACGAAGAGTCCAACGTTGCCCCTCCACCATCATCAACACAATCACTATCCCTCCCTTTCACTTTGTATGACACTTTGTTCCTCAGGTTCCCTTCCATTGACTGGATCTTCTTCTATTCCCTCAATGCTCAACAATCAGAACCTTCTTTCTTCTATGCCAATGTGATTCCAAAGCTCAAAGCCTCTCTCTCTCACACCCTCCAACACTACCCTCCTCTCGCTGGCAACATTCTTTGGCCTTCTGATTCCACAATTCCAATCATCAGTTACACCCCTGGTGATGCCGTTTCCGTCGTTGTTGCTGAGTCCAATGCTGAATTCAACCACTTCATAGATTACTCAGTGCCCCATGAAGCAACAGAGTCTCGTTTTTTAGTACCCCACTTGGAATCCTCGGATTCTCGTGCTTCTGCCCTAGCTCTTCAGATCACTCTTTTCCCCAACAAAGGCTTCAGCATTGGCATCAGCATCCACCATGCTGCTGTTGATGGAAGATCTTCCACCATGTTCATCAAGGCTTGGGCTTCTCTGTGCCAACAAATTATTATGAACGATGAAACAACATCACAAAGTGTGGTGGTGCCATCTTTGGTGCCGGAGTTGGAGCCTTCCTTTGACAGAACACTCATCAAAGACCCGGGAAATTGGAACCGCTTCTTGTTAGCAAAATGGTGCCCTAATATTGCTAATGGAAACAGTGATGGTGATGATAATGGGAAGCGAACCGTGAAGATTCTACCTTCCCCACCAAGACTCAAGGAAGCGTTTTCAGCCACGTCAGTGATTAAACCAACAATTGAGGAAGCAGTTAGAGCCACGTTTGTTCTCACACGAGAGGATTTGGAGAAGATAAAGAAAAGGGTCTTCTCCAAGTGGGACCAAGTGAAAGACCCAGAACCAGAACCAGAATCAGAATCAGAATCAAAATCAACGGTTAATTCTTCTTCAAAGCCACCAACTTTATCATCCTTTGTTCTTGCATGTGCATATTCTGTTGTGTGTATTGCAAAAGCGGTTCACGGGGTTGAAAAGGAGAAGCAAAAGTTTGGTTTCTGGTTCCCGGTGGATTATAGGGCTAGGTTAGAGCCTCCAATCCCTGATACCTATTTTGGAAACTGTGTGTGGAGCCACTTGGTGGATGCAGAACCCTTGGACTTCATAAAGGAAGAAGGGCTCGTCCTTGTTGCAAAAAGCATTAACAGAAAAGTGAAGACCTTACACAAGGAAGAAGTTTTCGGTAAATCGTCTTCTCGGTTCATGGCTTTGGCTAAAGAAGGAGCTGAAATGTTGGGAGTGTCGATGTCTAACAAATTTATGGTTTATGAGACTGATTTTGGTTGGGGGAAGCCTGCTAAGGTGGACATTATAAATTTGGATAGGGCTTCGAATTTGACCATGGGGTTGTTGGACAGCAAGGATGGGGATGGAGGTGTTGAAGTGGGGCTCGTTATGCATCAGAAGGTGATGGATCTCTTTGGTACTATTTTTCATGGAGGACTGAAAGATGAGTGA 1536 0.4499 MAVENIKVHEESNVAPPPSSTQSLSLPFTLYDTLFLRFPSIDWIFFYSLNAQQSEPSFFYANVIPKLKASLSHTLQHYPPLAGNILWPSDSTIPIISYTPGDAVSVVVAESNAEFNHFIDYSVPHEATESRFLVPHLESSDSRASALALQITLFPNKGFSIGISIHHAAVDGRSSTMFIKAWASLCQQIIMNDETTSQSVVVPSLVPELEPSFDRTLIKDPGNWNRFLLAKWCPNIANGNSDGDDNGKRTVKILPSPPRLKEAFSATSVIKPTIEEAVRATFVLTREDLEKIKKRVFSKWDQVKDPEPEPESESESKSTVNSSSKPPTLSSFVLACAYSVVCIAKAVHGVEKEKQKFGFWFPVDYRARLEPPIPDTYFGNCVWSHLVDAEPLDFIKEEGLVLVAKSINRKVKTLHKEEVFGKSSSRFMALAKEGAEMLGVSMSNKFMVYETDFGWGKPAKVDIINLDRASNLTMGLLDSKDGDGGVEVGLVMHQKVMDLFGTIFHGGLKDE* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2106 511 Pfam Transferase family 295 500 - -
Gso18g2106 511 Pfam Transferase family 12 189 - -
Gso18g2106 511 Gene3D - 274 510 IPR023213 -
Gso18g2106 511 SUPERFAMILY CoA-dependent acyltransferases 65 195 - -
Gso18g2106 511 Gene3D - 5 239 IPR023213 -
Gso18g2106 511 PANTHER - 1 511 - -
Gso18g2106 511 MobiDBLite consensus disorder prediction 1 22 - -
Gso18g2106 511 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 1 511 - -
Gso18g2106 511 MobiDBLite consensus disorder prediction 303 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2106 Gso-Chr18 54037346 54039303 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2106 44 500 Monolignol Biosynthesis Gene Families AT5G48930 23.013 2.45e-15 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2106 - - gmx:100782933 970.304