Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2104 ATGGCTATGCCATTCCCCAATTATATGGTGGTAGGAGCTTGGTATATACTACTTGTTATCTCTTGGAATTGTTTCAGCATTTCAATTGCGTCAAATGCAGCTTCTAAATCTGAATCCTCACTGCTAGAAGCAGAAGCACATGTTCTTCTTGAAAGTGAGTGGTGGCCGAGTAATTACACTAACCATGTTTCAAGTCGGTGCCAGTGGGCAGGCATTACATGCAACAATGCTGGAAGTATCACAAACATTACTTTGCCTGATGAACTCCAATTGGGAAACAAGTTGTGGAGGTTCAACTTTTCTTGCTTCCAAAACCTTGTTCACCTCAACCTTGCTGCACTAGGAATCAGTGGGAGTATTCCATATGGATTTGGTACCCTTTCCAAACTCACTTATCTTGACTTATCCTTTAATGATATAATGGGAACTATACCATCAGACATTTGGAATCTAAGGAACTTAGTGACCCTAAACTTGGCTAGAAACAAGCTTAGTGGGCTTATCCCTCCAGAGTTAGGAAAGTTGAGGAATTTGATTGAATTGGATTTAAGTGATAATAGTTTTATTGGTCCAATACCTGTGGAGATTGGTCAATTGAACAATTTGAAACATCTGTCCCTCGGTGAGAACAAGTTGAATGGTTCCATACCTTTAGAAATAGGGAATTTGAACAACCTTCTGATTCTAGATCTTAATACTAACAGTCTCACCGAAGTGATACTTCAAGATTTGCATAATCTTACCAGTTTGACAGAACTAAACTTGTCCAATAATGAGATTTTTAACTTGATCCCGCAAAAGCTTTCCCAATTGACCCAACTGAAGTATCTGAATATTTCAAATAACAAATTTTTTGGTGAAATACCTGCTGACATTGGAAATTTGTCTAAAATCTTGGTTCTAGACATGTCTAGAAACATGTTGGCTGGAGAAATCCCAGCCAGTTTTTGTACTTGCTCTAAGCTGGAGAAGTTGATTTTGAGCCATAACAATATAAACGGAAGCATTCCCTCTCATATTGGTGACCTTGTTTCGCTTGCTTTAATTGATTTGAGTCATAACTCAATAAGTGGAGAAATACCTTATCAGCTTGGGAGTGTGAAATACACAAGGATCTTGGATCTCAGTTATAATGAACTAAATGGAACCATTCCCAGATCCCTTGTATCATTGGGGAGGCTAGACTTGTCTTACAATTCTCTAGAGGGTGAAATCCCAGTTGCTCTCCAAAAATCTTTTCCACCTAAAGCATTCACTGGCAATGACAATTTGTGTGGCGACATCGCCCACTTCGCTGCTTGTTATTATTCCTCTCCTCACAAGTCACTTATGAAAATTTTCCTTCCTCTCACTGCTTTGCTTGCTCTTCTGTGCACTGCATACGTGTTCCTCCGCTGGTGTAAGGCTGGGAATTGCATGTCTGTATCAAAAGAAACAAAGAATGGTGACATGTTTTCAATATGGAACTATGATGGTAAAATAGCATACAAAGACATAATTGAAGCAACAGAGGGTTTTGACATCAAATACTGCATAGGGGCTGGTGGTTATGGTAGTGTCTACAGAGCACAGCTACCTAGTGGCAGAGTAGTGGCCTTGAAGAAACTCCACAATTTAGGACCCGACGAACCAGCCATCCACAGGATTTTCAAGAATGAGGTAAGAATGTTGACAAAGATAAGGCATAGAAATATTGTGAAGCTCTATGGATTCTGCTTGCATAACAGATGCAAGTTTCTGGTTTTGGAGTACATGGAGAGGGGAAGCTTGTATTGCGTTCTCCGCAATGACATTGAAGCTGTGGAGTTGGATTGGACCAAGAGGGTCAACATTGTGAAAGGCATAGCACATAGCTTATCATACCTTCACCATGATTGTAAGCCAGCAATTATTCATAGAGATGTAACAACAAAAAATGTTCTCTTGAATTTAGAAATGAAGGCTTGTCTCTCGGACTTTGGCATAGCAAGACTTCTAAAATCCGGTTCCTTCAATCGAACAGTACTTGCAGGCACTTATGGATATATTGCACCAGAACTTGCCTATAGTGATTGTGTGACTCAGAAATGTGATGTCTACAGCTTTGGAGTGGTTGCACTTGAAATTATCATGGGAAAACATCCTGGAGAGCTTGTTTCCTCATTAAGATCTGCATCCTCACAAGGAATTCTCTTCAAATATATATTAGACCCCAGATTAATATGCACCATCAATCAACAATCAACTCCGAGTTTAGCTCTTATAGCAACACTGGCTTTTGCATGTCTTCATTCTCAGCCAAGGCTTAGACCAACAATGCAAGTAGTGTGTGATAAACTTGTCACGGGAATGCCCCGATTAACCATACCATTTGAAGAAATTTCAATAAAGCAAATTGTAAATCAGGAATTCTAA 2394 0.396 MAMPFPNYMVVGAWYILLVISWNCFSISIASNAASKSESSLLEAEAHVLLESEWWPSNYTNHVSSRCQWAGITCNNAGSITNITLPDELQLGNKLWRFNFSCFQNLVHLNLAALGISGSIPYGFGTLSKLTYLDLSFNDIMGTIPSDIWNLRNLVTLNLARNKLSGLIPPELGKLRNLIELDLSDNSFIGPIPVEIGQLNNLKHLSLGENKLNGSIPLEIGNLNNLLILDLNTNSLTEVILQDLHNLTSLTELNLSNNEIFNLIPQKLSQLTQLKYLNISNNKFFGEIPADIGNLSKILVLDMSRNMLAGEIPASFCTCSKLEKLILSHNNINGSIPSHIGDLVSLALIDLSHNSISGEIPYQLGSVKYTRILDLSYNELNGTIPRSLVSLGRLDLSYNSLEGEIPVALQKSFPPKAFTGNDNLCGDIAHFAACYYSSPHKSLMKIFLPLTALLALLCTAYVFLRWCKAGNCMSVSKETKNGDMFSIWNYDGKIAYKDIIEATEGFDIKYCIGAGGYGSVYRAQLPSGRVVALKKLHNLGPDEPAIHRIFKNEVRMLTKIRHRNIVKLYGFCLHNRCKFLVLEYMERGSLYCVLRNDIEAVELDWTKRVNIVKGIAHSLSYLHHDCKPAIIHRDVTTKNVLLNLEMKACLSDFGIARLLKSGSFNRTVLAGTYGYIAPELAYSDCVTQKCDVYSFGVVALEIIMGKHPGELVSSLRSASSQGILFKYILDPRLICTINQQSTPSLALIATLAFACLHSQPRLRPTMQVVCDKLVTGMPRLTIPFEEISIKQIVNQEF* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2104 797 Gene3D Ribonuclease Inhibitor 330 426 IPR032675 -
Gso18g2104 797 Pfam Leucine Rich Repeat 153 175 IPR001611 GO:0005515
Gso18g2104 797 ProSiteProfiles Protein kinase domain profile. 506 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2104 797 Pfam Leucine Rich repeat 128 140 IPR001611 GO:0005515
Gso18g2104 797 Gene3D Ribonuclease Inhibitor 35 242 IPR032675 -
Gso18g2104 797 Gene3D Transferase(Phosphotransferase) domain 1 585 779 - -
Gso18g2104 797 Pfam Leucine rich repeat 273 332 IPR001611 GO:0005515
Gso18g2104 797 ProSitePatterns Protein kinases ATP-binding region signature. 512 534 IPR017441 GO:0005524
Gso18g2104 797 ProSiteProfiles Leucine-rich repeat profile. 249 270 IPR001611 GO:0005515
Gso18g2104 797 ProSitePatterns Tyrosine protein kinases specific active-site signature. 630 642 IPR008266 GO:0004672|GO:0006468
Gso18g2104 797 SMART LRR_typ_2 319 343 IPR003591 -
Gso18g2104 797 SMART LRR_typ_2 151 175 IPR003591 -
Gso18g2104 797 SMART LRR_typ_2 271 295 IPR003591 -
Gso18g2104 797 SMART LRR_typ_2 199 223 IPR003591 -
Gso18g2104 797 SMART LRR_typ_2 247 270 IPR003591 -
Gso18g2104 797 SMART LRR_typ_2 388 420 IPR003591 -
Gso18g2104 797 SMART LRR_typ_2 127 150 IPR003591 -
Gso18g2104 797 Pfam Protein kinase domain 510 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2104 797 SUPERFAMILY Protein kinase-like (PK-like) 485 773 IPR011009 -
Gso18g2104 797 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 17 410 - -
Gso18g2104 797 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 104 773 - -
Gso18g2104 797 Gene3D Ribonuclease Inhibitor 243 329 IPR032675 -
Gso18g2104 797 Gene3D Phosphorylase Kinase; domain 1 468 584 - -
Gso18g2104 797 SUPERFAMILY L domain-like 51 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2104 Gso-Chr18 54024329 54027374 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2104 100 678 Receptor kinase-like Gene Family AT4G08850 37.229 4.40e-132 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso18g2104 Pkinase 8.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2104 - - gmx:102670020 1541.94