Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2095 ATGTCAAAAATGTCTAGCCCCAATGGTCCAGAGATAGAAGAGAAGAGAGTTACAAAGGAAGATAAATTCAAATCTGCTAAAACTGAAATGGGTGAGGTGAAGGAAGAAAATGAGAGATTGAAGATGATGCTGGAAAGAGTAGAAAAGGACTATCACTCCCTTCAACTCCGTTTCTTTGACATCCTTCACAAAGATGTTTCAAAGAAGGGTTTAGCTGTTTCATCTACTTCCCTTGATCATGAAACTGCAGAGCCTGAGCTTGTGTCACTTTGCCTTGGAAGGAGTCCAATGGAGCCTAAGAAAGAATTAGCAAGAATTGGATACTCCAACAAACCAAAAGAAGAAGACGTTGGACCCAACCTTACTCTTGGATTAGACTCCAAACACCTTTTGTCAATGGAGGTTGTGTCTGATTTGAGTCCCACGAATAGCTCAGAAGAACCAAAGGAAGTTGAAGCTGAGGGAACAAATCAATCAGCAAAAGTGATAAATGTAAATGATGACGTTTCAGATCAAATGCCAGCCAAGAGAGCCAGGGTATCTGTGAGAGCAAGATGTGATACTCCCACGATGAATGATGGATGCCAGTGGAGGAAATATGGACAGAAGATAGCAAAGGGAAATCCATGTCCAAGGGCATACTATCGTTGCACAGTTGCACCAACATGTCCAGTCAGGAAGCAGGTGCAAAGGTGTGCTGAGGACTTGTCCATCTTAATCACCACATATGAAGGAACACACAACCACCCTCTTGCAGTTTCAGCCACAGCCATGGCTTCAACCACTTCAGCTGCTGCCTCCATGCTGTTGTCAGGTTCTTCAACATCTCACCTTACAAGCCACAATTCTGCATCTTTTGGAAATGCTCCTACCACACTACTCAATGGTGTGAGTTTCAGTCACCAGTTTGATGAACTAAGAGCCAAACAAATGTTATCACCACCAAACCATGTCTCACCAAATCTGTTTTCAACAATCACTTTAGACATGACTTCTTCAGCTTCTAATTCCTCCTCATCAACTCAATTCCATCATCGCTTACCTTCGACGATTGCTTCAATTTCAAACCCAAAATTTTCTCCAGCTAGTCTCAGCTTTTGTTCCCAAGATAATAACTTCATACCATCCATTTGGGGTAAGGGGGGTGACACTTCCACAACACCAATTGACAAAATCCCCATGACTAGGCCAGTTATCAAGGGAAATCAATATTTCCAAGAAAATTTCTATCAACAAAGCATAACAAAGCAAACTCCTTCCAAAGAAGCTTTGGCAGAAACAATAACAAAGGCAATCAGCACAGACCCGAGTCTTCGTTCAGTAATAGCTGCTGCAGTTTCATCAATAGTGGGGAATGGATCAAGCAGTGGGAACCAAGAGGAATCAGACAATGTTCTTGGTTCAGGGTTGAACTTAAAACTTGGGGAGCATTTTCAATTGGCTTCACCCAATCCCTTGAACCAGAATAGGAAAGAATGCTTAACAAGCTACTTCAAAAGTTTGTCCTCAAAGAATTCTGAGGCAGGAAGCTTCATTTTTCTCCAACCATCATTGCCATTTTCTTTCTCCAAGAGTAGCACAAATCAGGTCAACCATTATGTTCAAGAAATGAACTCACATCATTAG 1626 0.4188 MSKMSSPNGPEIEEKRVTKEDKFKSAKTEMGEVKEENERLKMMLERVEKDYHSLQLRFFDILHKDVSKKGLAVSSTSLDHETAEPELVSLCLGRSPMEPKKELARIGYSNKPKEEDVGPNLTLGLDSKHLLSMEVVSDLSPTNSSEEPKEVEAEGTNQSAKVINVNDDVSDQMPAKRARVSVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPTCPVRKQVQRCAEDLSILITTYEGTHNHPLAVSATAMASTTSAAASMLLSGSSTSHLTSHNSASFGNAPTTLLNGVSFSHQFDELRAKQMLSPPNHVSPNLFSTITLDMTSSASNSSSSTQFHHRLPSTIASISNPKFSPASLSFCSQDNNFIPSIWGKGGDTSTTPIDKIPMTRPVIKGNQYFQENFYQQSITKQTPSKEALAETITKAISTDPSLRSVIAAAVSSIVGNGSSSGNQEESDNVLGSGLNLKLGEHFQLASPNPLNQNRKECLTSYFKSLSSKNSEAGSFIFLQPSLPFSFSKSSTNQVNHYVQEMNSHH* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2095 541 Pfam WRKY DNA -binding domain 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g2095 541 Coils Coil 23 57 - -
Gso18g2095 541 SUPERFAMILY WRKY DNA-binding domain 184 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g2095 541 MobiDBLite consensus disorder prediction 137 161 - -
Gso18g2095 541 MobiDBLite consensus disorder prediction 9 34 - -
Gso18g2095 541 Gene3D WRKY domain 176 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g2095 541 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 22 531 IPR044810 GO:0003700
Gso18g2095 541 PANTHER WRKY TRANSCRIPTION FACTOR 72-RELATED 22 531 - -
Gso18g2095 541 SMART WRKY_cls 191 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g2095 541 MobiDBLite consensus disorder prediction 1 34 - -
Gso18g2095 541 ProSiteProfiles WRKY domain profile. 186 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2095 Gso-Chr18 53931842 53934777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2095 30 460 WRKY Transcription Factor Family AT5G15130 43.011 1.75e-81 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso18g2095 WRKY 6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2095 - - gmx:100780402 1009.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2095 18 53931842 53934777 Gso9g1968 9 44093994 44097024 GST