Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2069 ATGAGAATTGGTTCTCCTTCTTCTTCTTCCTCTTCCTCCGGTTGTTCGCGTTTCTGGTCCTCGGCGCTCCGATCAAAGCGCCTTATGTCGCCGGCGGAGAAGGCCGCCCGCGAAAGCTCCGACCTCGGCCTCTCCCGCCGCCTCGGCGTCCTCGACCTCGTACTCCTCGGAATCGGCGCCTCCATCGGCGCCGGCATCTTCGTCGTCACCGGCACCGTCGCCCGCGACGCCGGACCCGGAGTAACAATAAGTTTTATACTTGCGGGAGCATCGTGCGTTATAAATGCTCTCTGTTATGCTGAACTAGCTACCCGATTTCCTGCTGTTGTTGGAGGAGCATATCTGTATGCGTACACAGCTTTTAATGAACTTACAGCTTTTCTTGTTTTTGGACAATTGATGCTTGACTATCACATTGGGGCAGCTAGTATAGCGAGAAGCCTAGCCAGTTATCTAATAAATATTCTAGAACTCTTCCCTGTTTTCAAAGATAACATTCCAAAATGGATTGGGCATGGTGAAGACATTGGAGATGTGCTATCCATCAATGTCTTGGCTCCAATTCTGCTAGTTCTTCTGACTTTTATTCTCTGTCGGGGTGTTCAAGAATCGTCTGTTGTGAATTCTCTTATGACAGTGACCAAGATAATCATAGTTATCATTGTCATTTTTGCTGGAGCATTTGAGGTTGACGTTTCCAACTGGTCTCCCTTTGCTCCAAATGGTTTAAAAGCCATATTTACGGGAGCTACTGTAGTCTTCTTTGCTTATGTTGGATTTGATGCAGTTGCAAATTCTGCTGAAGAATCTAAGAGGCCTCAGCGGGATTTGCCAATAGGCATAATAGGAAGCCTCTTAATATGTATTGCATTGTACATTGGAGTTTGCCTGGTGATTACTGGAATGGTTCCATATAATCTTCTAGGAGAAGATGCTCCTTTGGCTGAAGCTTTTTCGTCTAAGGGATTAAAATTTGTTTCTATTCTGATTAGTGTTGGTGCTGTTGCTGGACTTACAACAACACTCCTTGTTGGTCTATACGTTCAGTCTCGGCTATATCTTGGGCTTGGCAGGGATGGCTTACTACCCTTAGTATTTGCTAAAGTCCACTCCAAATACCACACCCCTGTTCATTCTCAGATCTGGGTTGGCTTGGTTGCCAGTGTTTTGGCTGGGCTATTTAATGTTCATGTGCTCTCTCACATTCTTTCCGTTGGTACACTGACTGGCTATTCGGTTGTCTCAGCATGTGTTGTCGTTCTTCGCTGGAAGGATAAGACAAATAGTCAAGTGTCATCTTCTGCTGAGCGGGAAGGCATAATTTGCCTCATTGCTGTTGCTCTTTGTGGATTTGCTAGTGGGCTCTTGTACCGATATGATGCTTCATTTATTTTTCTGATTCTGGCTTTAGTTATTGCAGTTGGTGCTTCAGCTGCTCTTGTTTTCCGCCAGAACACATTGATGGTTGTATGTGTCAAGTACACGAAACGGAGAGGCAATCTCAAGGTTTATGCAGATGCACCAGGGTTTTCTTGCCCAGGGGTTCCCCTTCTGCCAAATATTTGCATCTTTTTTAACATGTTCTTATTTGCCCAGCTACATCATGAAGCATGGGTGAGATTTGTGATTCTTTGTGTTGTCATGGTTGGTGTTTATGCAATATACGGTCAATATCATGCTAACCCCAGTGCAGAAGAGAATGTCTATCAAAGGGCACTAGAGGAAGAAGCTCTATGA 1737 0.4519 MRIGSPSSSSSSSGCSRFWSSALRSKRLMSPAEKAARESSDLGLSRRLGVLDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVINALCYAELATRFPAVVGGAYLYAYTAFNELTAFLVFGQLMLDYHIGAASIARSLASYLINILELFPVFKDNIPKWIGHGEDIGDVLSINVLAPILLVLLTFILCRGVQESSVVNSLMTVTKIIIVIIVIFAGAFEVDVSNWSPFAPNGLKAIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLICIALYIGVCLVITGMVPYNLLGEDAPLAEAFSSKGLKFVSILISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPLVFAKVHSKYHTPVHSQIWVGLVASVLAGLFNVHVLSHILSVGTLTGYSVVSACVVVLRWKDKTNSQVSSSAEREGIICLIAVALCGFASGLLYRYDASFIFLILALVIAVGASAALVFRQNTLMVVCVKYTKRRGNLKVYADAPGFSCPGVPLLPNICIFFNMFLFAQLHHEAWVRFVILCVVMVGVYAIYGQYHANPSAEENVYQRALEEEAL* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2069 578 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Gso18g2069 578 Gene3D Amino acid/polyamine transporter I 44 488 - -
Gso18g2069 578 PANTHER CATIONIC AMINO ACID TRANSPORTER 9, CHLOROPLASTIC 8 573 - -
Gso18g2069 578 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 8 573 - -
Gso18g2069 578 PIRSF AA_transporter 439 578 - -
Gso18g2069 578 PIRSF AA_transporter 32 501 - -
Gso18g2069 578 Pfam C-terminus of AA_permease 510 559 IPR029485 -
Gso18g2069 578 Pfam Amino acid permease 48 453 IPR002293 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2069 Gso-Chr18 53646134 53651172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2069 10 484 Organic Solute Cotransporters AT1G05940 71.458 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2069 K03294 - gmx:100776671 1003.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2069 18 53646134 53651172 Gso9g1986 9 44275497 44280445 GST
Gso13g0483 13 16914470 16916875 Gso18g2069 18 53646134 53651172 PCT
Gso19g0119 19 1295440 1297664 Gso18g2069 18 53646134 53651172 PCT