Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2053 ATGGACTACCTCACAACACTTCTGCTACTGATTAGCATAGTGAGTGCAAGCATTATTCGCATATTGATTCGTAGATTTGAATCTGTAAGGCTTCCACCAGGGCCACGTCCATTTCCTATCATAGGAAACATCTTAGAACTTGGCATAAATCCACACAAATCACTCACCAAATTGTCCAAGATTTATGGACCTCTTATGACTTTGAAACTTGGTAGCATTACCACCATAGTCATTTCCTCCCCTCAAGTAGCTAAACAAGTATTGCATAAAAATGGCCATGTCTTTTCTAGTAGAACAATCCCACATTCAGTGCAAGCACTTGACCATCATAGATTTTCTATTGTGTGGTTGCCCCCATCACCCAAATGGAGGAACCTTAGAAGAGTTTGTGCTACAAAAGTATTCTCTCCACAACTTCTTGACTCCACTCAAATCCTTCGCCAACAAAAGGTTCATGATTTATTGGATTTTGTGAAAGAAAGATGCAAGAAAGGTGAGGTTATTGGATTTTGTGAAAGAAAGATGCAAAAAATCTTGGTCAATGTGTGGGCCATAGGAAGAGATCCAACCATTTGGGAGAATCCAGAAATGTTTATGCCTGAAAGATTTTTGGAGTGTGAGATTGATTTTAAAGGTCATGACTTTGAACTCATTCCTTTTGGGACAGGCAAAAGGATATGTCCTGGATTGCCATTAGCTCATAGGTCAATGCATTTAGTGGTGGCATCCCTTGTGCATAACTTTGAATGGAAGCTAGCTGACGGGTTAGTGCCAGAAAACATGAACATGGAGGAGCAATATGGAATAAGCATAAAGAGGGTCCAATCCCTTCTAGTTGAAGCCATTTCAATCAAGCACGATTAG 864 0.4016 MDYLTTLLLLISIVSASIIRILIRRFESVRLPPGPRPFPIIGNILELGINPHKSLTKLSKIYGPLMTLKLGSITTIVISSPQVAKQVLHKNGHVFSSRTIPHSVQALDHHRFSIVWLPPSPKWRNLRRVCATKVFSPQLLDSTQILRQQKVHDLLDFVKERCKKGEVIGFCERKMQKILVNVWAIGRDPTIWENPEMFMPERFLECEIDFKGHDFELIPFGTGKRICPGLPLAHRSMHLVVASLVHNFEWKLADGLVPENMNMEEQYGISIKRVQSLLVEAISIKHD* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2053 287 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2053 287 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2053 287 SUPERFAMILY Cytochrome P450 24 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2053 287 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 168 - -
Gso18g2053 287 PANTHER CYTOCHROME P450 FAMILY PROTEIN 167 285 - -
Gso18g2053 287 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 220 229 IPR017972 GO:0005506|GO:0016705
Gso18g2053 287 Gene3D Cytochrome P450 172 278 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2053 287 Gene3D Cytochrome P450 20 171 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2053 287 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 167 285 - -
Gso18g2053 287 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 168 - -
Gso18g2053 287 Pfam Cytochrome P450 32 166 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2053 287 Pfam Cytochrome P450 176 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2053 287 SUPERFAMILY Cytochrome P450 177 277 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2053 Gso-Chr18 53462218 53463229 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2053 166 279 Cytochrome P450 AT1G33720 56.140 9.03e-44 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2053 - - gmx:102663793 561.222