Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2051 ATGGACTACCTCACAACACTTCTGCTACTGATTAGCATAGTGAGTCGCAATGAGATGTTACACTTATTTATGGATTTATTTGTGGCCGGGATTGACACAACATCAAGCATTGTGGAGTGGATTGTGGCAGAACTATTACGCAACCCACATAAATTGGCAAAAGTAAGAACAGAGATATTTGAAGTGATTGGCAAAGATGGAACACTTGAAGAACAACACATCTTAAAGTTGCCATTTTTACGAGCAGTGGTGAAGGAAACTCTTCGTTTGCACCCACCAGGTCCATTTTTAGTACCCCACAAGTGTGATGAAATTGTAAGCATATGTGGCTTCAAATTGCCTAAAAATGCACAAATCTTGGTCAATGTGTGGGCCATAGGAAGAGATCCAACCATTTGGGAGAATCCAGAAATGTTTATGCCTGAAAGATTTTTGGAGTGTGAGATTGATTTTAAAGGTCATGACTTTGAACTCATTCCTTTTGGGACAGGCAAAAGGATATGTCCTGGATTGCCATTAGCTCATAGGTCAATGCATTTAGTGGTGGCATCCCTTGTGCATAACTTTGAATGGAAGCTAGCTGACGGGTTAGTGCCAGAAAACATGAACATGGAGGAGCAATATGGAATAAGCATAAAGAGGGTCCAATCCCTTCTAGTTGAAGCCATTTCAATCAAGCACGATTAG 687 0.4076 MDYLTTLLLLISIVSRNEMLHLFMDLFVAGIDTTSSIVEWIVAELLRNPHKLAKVRTEIFEVIGKDGTLEEQHILKLPFLRAVVKETLRLHPPGPFLVPHKCDEIVSICGFKLPKNAQILVNVWAIGRDPTIWENPEMFMPERFLECEIDFKGHDFELIPFGTGKRICPGLPLAHRSMHLVVASLVHNFEWKLADGLVPENMNMEEQYGISIKRVQSLLVEAISIKHD* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2051 228 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 226 - -
Gso18g2051 228 Pfam Cytochrome P450 14 209 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 161 170 IPR017972 GO:0005506|GO:0016705
Gso18g2051 228 Gene3D Cytochrome P450 2 225 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 SUPERFAMILY Cytochrome P450 13 219 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PRINTS P450 superfamily signature 29 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PRINTS P450 superfamily signature 82 93 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PRINTS P450 superfamily signature 159 168 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PRINTS P450 superfamily signature 168 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PRINTS E-class P450 group I signature 18 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PRINTS E-class P450 group I signature 38 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PRINTS E-class P450 group I signature 81 99 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PRINTS E-class P450 group I signature 122 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PRINTS E-class P450 group I signature 158 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PRINTS E-class P450 group I signature 168 191 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2051 228 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2051 Gso-Chr18 53439740 53441140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2051 17 220 Cytochrome P450 AT1G33720 56.373 1.14e-84 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2051 - - gmx:106797192 451.44