Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2050 ATGGACTACCACACAACAGTTCTGCTACTGATTACCTTTGTGAGTGCAACCATTATTCTCATATTCATTCGGAGATTATTCAACCAAACCTCAGAATCAGAATATGCAAAGCTTCCACCAGGGCCTCGTCCATTTCCTATCATAGGAAACATCTTGGAACTTGGCACAAATCCACACATAGCACTCACCAAACTCTCAAAGATTTATGGATCTCTTATGACTTTTAAACTTGGCAGAATAACCACCTTAGTTATCTCCTCTCCTCAAGTAGCCAAAGAAGTACTACTTGAAAATGGCCAAGTCCTTTCTAGCAGAACAATTCCACATTCAGTCCATGCACTTGACCATCACATATACTCTACTGTGTGGCTGCCACCATCAGCTCAATGGAGGAACCTTAGGCGAGTTTGTGCAACAAAAATATTCTCTCCACAATTGCTTGACTCCACTCAAATCCTTCGCCAACAAAAGGTTAAAGATTTATTGGATTTTGTGAAAGAACGATGCAAGAAAGGTGGGGTTGTGGATATTGGAGAGGTTGTCTTTACAACAATCCTTAATTCCATTTCAACCACTTTCTTCTCTATGGATTTGTCTGATTCTACATCTGAAAAGTCTCATGAGTTCATGAACATTATTCGAGGCATAATGGAAGAAATTGGAAGGCCTAATGTTGCAGACTTGTTTCCCATTCTTCGTCCACTTGACCCTCAACGTGTCCTTGCTAGGACGACCAATTATTTTAAGAGGTTGCTTAAGATTATCGATGAAATTATTGAAGAAAGAATGCCTTCAAGAGTTTCAAAATCCGACCACTCCAAGGTGTGCAAGGATGTATTGGATTCACTTCTTAACGATATTGAAGAAACGGGTTCTCTTTTGAGTCGCAATGAGATGTTACATTTATTTCTGGATTTACTTGTTGCTGGGATTGACACAACATCAAACACAGTGGAATGGATTATGGCGGAGCTACTACGCAACCCAGATAAAATGGAAAAAGCAAGAAAAGAGTTATCTCAAACAATTGACAAAGATGCAATAATTGAAGAATCACACATCTTAAAGTTGCCATTTTTACAAGCAGTGGTGAAGGAAACTCTTCGCTTGCATCCTCCTGCTCCATTTTTAGTACCCCATAAGTGTGATGAAATGGTAAGCATATCTAGCTTCAATGTGCCTAAAAATGCACAAGTCTTGGTCAATGTGTGGGCTATGGGACGAGACCCAGCTATTTGGGAAAATCCAGAAATGTTTATGCCTGAAAGATTTTTGGAGCGTGAGATTGATTTTAAAGGTCATGATTTTGAATTCATACCTTTTGGGGCAGGTAAAAGGATATGCCCAGGATTACCGTTCGCTCACAGAACAATGCATTTAATGGTGGCATCTCTTGTGCATAACTTTGAATGGAAACTAGCTGATGGGTTAATGCCAGAACACATGAACATGAAGGAGCAATATGGGTTGACCTTAAAGAAGGCTCAACCACTTCTAGTTCAAGCGATTGCAATCACGCACATTTAA 1527 0.3982 MDYHTTVLLLITFVSATIILIFIRRLFNQTSESEYAKLPPGPRPFPIIGNILELGTNPHIALTKLSKIYGSLMTFKLGRITTLVISSPQVAKEVLLENGQVLSSRTIPHSVHALDHHIYSTVWLPPSAQWRNLRRVCATKIFSPQLLDSTQILRQQKVKDLLDFVKERCKKGGVVDIGEVVFTTILNSISTTFFSMDLSDSTSEKSHEFMNIIRGIMEEIGRPNVADLFPILRPLDPQRVLARTTNYFKRLLKIIDEIIEERMPSRVSKSDHSKVCKDVLDSLLNDIEETGSLLSRNEMLHLFLDLLVAGIDTTSNTVEWIMAELLRNPDKMEKARKELSQTIDKDAIIEESHILKLPFLQAVVKETLRLHPPAPFLVPHKCDEMVSISSFNVPKNAQVLVNVWAMGRDPAIWENPEMFMPERFLEREIDFKGHDFEFIPFGAGKRICPGLPFAHRTMHLMVASLVHNFEWKLADGLMPEHMNMKEQYGLTLKKAQPLLVQAIAITHI* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2050 508 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 506 - -
Gso18g2050 508 Gene3D Cytochrome P450 25 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 506 - -
Gso18g2050 508 SUPERFAMILY Cytochrome P450 39 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Gso18g2050 508 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g2050 508 Pfam Cytochrome P450 39 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2050 Gso-Chr18 53436862 53447946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2050 6 498 Cytochrome P450 AT2G45550 44.355 6.19e-155 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2050 - - gmx:100809461 942.954