Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2038 ATGCCTCGTGGGACGCTTGAAGTTATTCTAATCAGCGCAAAAGACCTAAAGGACAGTGATTTTTTCGGGAAAATGGATCCTTATGTGATTCTCACTTATCGCGCACAAAAGCACCGAAGCAGTGTGGCTAAAGGTGCAGGATCTAAACCCCGTTGGAATGAAAGCTTCCTTTTCACTGTTTCTGATAGTGTATCTGAACTTAATCTGAGGCTCATGGACCAGGATTTGTTAACTAGTGATGATTTCCTTGGCGACGCAAAAATTAATCTGGAACCAGTGTTTGCTGTGGGGAGCATTCCAGAAACTTCTTACAATGTTGTGAAGGACCAGAAGTACTGTGGGGAGATCAAGGTTGCACTCACCTTTAATCCTGAGAGAGGCAGTGGACTCGGCTATGGTGATGAATAA 408 0.4412 MPRGTLEVILISAKDLKDSDFFGKMDPYVILTYRAQKHRSSVAKGAGSKPRWNESFLFTVSDSVSELNLRLMDQDLLTSDDFLGDAKINLEPVFAVGSIPETSYNVVKDQKYCGEIKVALTFNPERGSGLGYGDE* 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2038 135 Gene3D C2 domain 2 125 IPR035892 -
Gso18g2038 135 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
Gso18g2038 135 Pfam C2 domain 4 94 IPR000008 -
Gso18g2038 135 PANTHER ELICITOR-RESPONSIVE-LIKE PROTEIN 1 128 - -
Gso18g2038 135 SMART C2_3c 5 102 IPR000008 -
Gso18g2038 135 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gso18g2038 135 PANTHER C2 DOMAIN-CONTAINING 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2038 Gso-Chr18 53161130 53163599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2038 4 95 C2H2 Transcription Factor Family AT4G21160 31.522 8.22e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2038 - - gmx:100814819 272.322