Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g2029 ATGAATATGATGCGAAGGTTGAAAAGCATTGCTTCTGGGAGGACTTCCGTTTCATCAGATCCTGGAGGGGATTGTACCACAAAAAGAGTAAAGTTTGATCAAGAAACCGAAGGAAAGGTCAATGAGGAAACATATCCTAATGAGAGATGCGGAAAAGATCAGGAGCAGTATGTAGATGCATTAAAAGAAAGTGTTAATTCTAATGTTCCTTCAGTGGCTAGAACTGAGAAGTCAGGCTTTGATCAGCTTCCAAAAGAATTAAATGAAATGAAGATTGGAGACGACAAAGGCAAAAACAACAATAAGAAGGATATGGAAGCAACTATTGTGAATGGTAATGGAACAGAAACAGGCCAAATAACTACAACTGTTATTGGTGGTCGAGACGGACAACCAAAGCGGACAATCTCATACATGGCAGAACGTGTGGTTGGCACTGGTTCTTTTGGTGTTGTTTATCAGGCTAAGTGCCTTGAAACTGGAGAAGCAGTCGCCATAAAAAAAGTGTTGCAAGACAAGAGATATAAGAATAGGGAACTGCAGGTTATGCGTATGCTTGACCATACTAATGTTCTCAGACTAAAGCACTGTTTCTATTCAACAGCTGAGAAAGATGATTTGTACCTTAACCTAGTTTTGGAGTATGTACCTGAAACTGTCTACAGAGTTTCAAAGCACTATATCAGAATGCACCAGCATATGCCTATCATTAATGTGCAACTGTATACATACCAGATATGCCGTGGTTTAAATTATTTGCATCATGTGATCAGAGTCTGTCATCGGGACATTAAACCCCAGAATCTATTGGTTAATCCCCAGACTCATCAGTTAAAAGTATGTGATTTTGGGAGTGCAAAGATGTTGGTGCCTGGCGAACCCAACATATCGTACATATGCTCGCGGTATTATAGAGCTCCAGAACTTATATTTGGTGCAACAGAATACACAACTGCTATTGATATTTGGTCTGCTGGTTGTGTGTTGGCTGAGCTTCTTGTAGGACATCCAATGTTTCCCGGAGAGAGTGGGGTTGATCAATTGGTAGAGATCATTAAGATCTTGGGAACACCGACCAGAGAAGAAATAAAGTGCATGAATCCAAATTACACCGAATTTAAGTTTCCTCAGATAAAAGCACACCCATGGCATAAGGTTTTTCACAAGAAGATGCCTTCAGAAGCAGTGGATCTAGTGTCAAGGATGCTTCAGTATTCACCAAATCTACGATGCACTGCTTTGGAAGCATGTGCACACCCTTTCTTTGATGATCTGCGAGAACCAAATGCATGCTTGCCAAATGGGCAATCATTGCCTCCATTGTTCGATTTCACTGCTCAAGAACTGGCAGGTGCACCTGATGAGTTGCGGCGACGTCTCATTCCTGAGCATGCAAGAAGTTGA 1404 0.4138 MNMMRRLKSIASGRTSVSSDPGGDCTTKRVKFDQETEGKVNEETYPNERCGKDQEQYVDALKESVNSNVPSVARTEKSGFDQLPKELNEMKIGDDKGKNNNKKDMEATIVNGNGTETGQITTTVIGGRDGQPKRTISYMAERVVGTGSFGVVYQAKCLETGEAVAIKKVLQDKRYKNRELQVMRMLDHTNVLRLKHCFYSTAEKDDLYLNLVLEYVPETVYRVSKHYIRMHQHMPIINVQLYTYQICRGLNYLHHVIRVCHRDIKPQNLLVNPQTHQLKVCDFGSAKMLVPGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLAELLVGHPMFPGESGVDQLVEIIKILGTPTREEIKCMNPNYTEFKFPQIKAHPWHKVFHKKMPSEAVDLVSRMLQYSPNLRCTALEACAHPFFDDLREPNACLPNGQSLPPLFDFTAQELAGAPDELRRRLIPEHARS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g2029 467 PANTHER SHAGGY-LIKE KINASE 6 467 - -
Gso18g2029 467 SUPERFAMILY Protein kinase-like (PK-like) 137 446 IPR011009 -
Gso18g2029 467 ProSiteProfiles Protein kinase domain profile. 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2029 467 Gene3D Transferase(Phosphotransferase) domain 1 218 466 - -
Gso18g2029 467 SMART serkin_6 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2029 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Gso18g2029 467 MobiDBLite consensus disorder prediction 1 28 - -
Gso18g2029 467 ProSitePatterns Protein kinases ATP-binding region signature. 144 168 IPR017441 GO:0005524
Gso18g2029 467 Gene3D Phosphorylase Kinase; domain 1 124 217 - -
Gso18g2029 467 MobiDBLite consensus disorder prediction 9 23 - -
Gso18g2029 467 CDD STKc_GSK3 133 425 IPR039192 -
Gso18g2029 467 Pfam Protein kinase domain 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g2029 467 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g2029 Gso-Chr18 53056822 53061632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g2029 144 431 Core Cell Cycle Gene Families AT1G76540 35.548 9.30e-55 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gso18g2029 Pkinase 2.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g2029 K00924 - gmx:100786458 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2029 18 53056822 53061632 Gso9g2186 9 46190438 46195113 GST