Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1988 ATGAACATGGATATGGCTGGTAGTTTGCCGCAGTCGAGAGTGTTGCATGGAGGTGTGGGGACGAGTTACAAACGCAGATCAGTAGGTCAGTTAGGTTGCTTTGATTTTAGAGGGAGAGATTTTGGTTGTGCTTCTTTTGGAGACTCGAGAAGTGTTTCGAGATTGCGGAGGAGTGGGATGAATGTTTCTGCTTGTTGGAATAATTCGAGAGTAGTTACTGGTAGGGAGTTTAAGGTTTTGAATCCGAAGAGAAGTTTGTCTTGTAAGAATAATAATCTTTTCATGGGGTCTCGAGTGATTTGGTCGAAGTGCCAGGGTAATGATTCTTTAGCTTATGTTAATGGAAATGGCCGGAATGTTGATTATGTGGAAGGTTCGGGTGAGGATGCAGGATTGGGGCCTGTTTCTAGTGCTGAACTGGATGCACCTTTGGAAGAAGAAGAAGAAGGGCAAGCTGAGAGGAAAGAGGGAGGGAGTGAAATAGGATTAGAGGAACTAAGTGTGGATGAACTGAAAGAGCTATTGCAAAAGGCCTCGAAGGAGCTAGAAGTAGCTAAAATTAATAGTACCATGTTTGAGGAAAAGGTTAAAAAAATATCAGAGACTGCCATTTCCTTGCATGATGAAGCAGTCAATTCTTGGAACAATGTTAATTCTACCCTTGACACCATCCAAGAAATAGAAAATGAAGAACATACAGCCAAAGAAGCTGTCCAAAATGCAACAATGGCTCTTTCATTAGCCGAGGCAAGGCTTCAAGTAGCCATAGAAACTTTGGAGGCTGCAAAAGAAGTTCTTGATTCAGCACAAGGTTCTAATGAGAGCAATGGTGATAAGGACATGGTGGAAGAGGAGCAAGCTCTTTTGGTTGCTCAAGAAGATATCAAGGAATGCCAGGCTAATTTAGCAAATTGTGAGGCAGAGCTGAGGCGCTTGCAAGATAAAAAGGAAGAGGTGCAGAAGGAAGTGAGCAAATTGCAAGAAATTGCTGAAAAGGCTCAGCTGAAAGCGGTGAAAGCTGAAGAGGATGTTACAAACATAATGCTAATGGCAGAGCAAGCTGTTGCCTTTGAACTTGAGGCTACAAAATGTGTAAATGATGCAGAGATTGCCCTACAGCGAGCAGATAAGTCTAATTCTAATTCAAATGCTGATACCATAGAAACTACACAAGCACAAGATGTTGGGGCTGTTTCTGAGGTGGAGAAAGTGGTTCAAGGTTTTTCGGGTGATGTTGTTGAACGACACAGAGATTTGGCAATTGATGGCGAATCTTTGCTTGCCAATTTATCACCTGAGACTTTATCTGATAAAACCAGCCAAATTTTGGAAGACAGAACACAGTCTGATTATTTAAGTGATAATGAGAATGCTGTGCAAACAAAAAAGCAAGAAACACAGAAAGAATTGACCAGAGATAGTTCACCGTTTGCTCCAAAGGCATTATTGAAAAAGTCTTCTCGATTCTTTTCTGCATCATTCTTCTCTTCTGCTGAAGATGGGACTGAGTTCACACCAGCATCAGTCTTCCAGGGCCTTGTGTTATCTGTACAGAAGCAGTTGCCCAAGCTGATATTTGGGTTATTGTTAATGGGAGCAGGGGTTGCCTTCTATTCTAATAGAGTGGAGAGGAATGCTCAGCTGCTTCCACAGGCAGATGTTATTATGACCAGTGTTGAAGAAGTTTCCTCTAGTGCAAAGCCTTTGGTTAGACAACTTCAGAAACTACCCAAGAAAATCAAGAAAATCATTGCATCATTACCTCATCAAGAGGTGAACGAGGAAGAAGCCTCCCTTTTTGACATGCTCTGGTTATTACTTGCCAGTGTTATATTTGTGCCAATATTTCAAAAAATCCCTGGAGGAAGTCCTGTTCTTGGCTACTTGGCTGCTGGTATCTTGATTGGGCCTTATGGTCTCTCTATCATTCGTCACGTTCATGGGACAAAAGCAGTAGCTGAATTTGGAGTTGTTTTCCTTCTATTCAATATTGGCCTGGAGCTCTCGGTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTTGGCTCTGCACAGGTGTTGGCAACTGCTGTAGCTGTTGGCTTGATAGCTCATTATATTTGTGGCCAAGCTGGTCCAGCTGCTATTGTCATTGGGAATGGCCTAGCATTATCATCCACTGCTGTTGTTCTGCAGGTGTTGCAGGAGAGAGGTGAGAGCACTTCACGGCATGGCCGAGCTACTTTTTCTGTGTTACTTTTTCAGGATCTGGCTGTTGTGGTCTTGCTAATACTCATACCTCTTATTTCTCCTAATTCTTCCAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCACTTGGACTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGCCATAATTGCTGGGGGACGATTGCTCCTTCGACCAATATACAAGCAGGTTGCAGAAAATCAAAATGCAGAAATTTTCTCAGCTAATACACTCCTTGTTATTCTTGGCACAAGTCTTCTTACAGCCAGGGCAGGACTTTCCATGGCATTGGGAGCATTTTTGGCTGGTTTACTACTGGCAGAAACTGAATTTTCCTTACAGGTTGAATCTGATATTGCTCCATATCGTGGCCTTCTTTTGGGGCTCTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAACTTTCCAGTCATCATGGGCGCACTAGGACTCTTAATATGCGGAAAGACTATCTTGGTTTGTTTGATGGGTAGAATGTTTGGGATTTCTCTCATTTCTGCCATCAGAGTTGGTCTTCTTCTTGCTCCTGGTGGGGAGTTTGCATTTGTGGCTTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGCTGTCATCTTTGCTGTTTCTTGTTGTGGGCATTTCAATGGCCATCACACCATGGCTAGCTGCAGGAGGCCAGTTGATTGCTTCCCGTTTTGAGCAGAATGATGTTAGAAGTTTATTGCCGGTAGAAAGTGAGACAGATGATTTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCCCAACTTCTTTCAGAGCGTCTTATTCCATTTGTCGCACTAGACGTAAGAAGTGATAGAGTGGCAGTTGGGCGTGCTCTGGATCTCCCTGTGTACTTTGGAGATGCTGGTAGTAGAGAGGTCCTACATAAGGTTGGGGCTGAAAGGGCATGTGCTGCAGCAATAACTCTTGATACACCTGGTGCAAATTATAGAACAGTTTGGGCTTTGAGCAAGTACTTCCCAAATGTGAAGACTTTTGTTCGTGCCCATGATGTTGATCATGGATTAAATTTAGAAAAGGCTGGAGCTACTGCTGTTGTCCCGGAGACCTTGGAACCAAGTCTTCAACTAGCAGCTGCTGTGCTTTCTCAGGCTAAACTCCCCACATCAGAGATTGCAGCAACTATAAATGAATTCAGATCTCGACATCTGGCTGAGCTCACAGAGCTGTGTGAAGCAAGTGGAAGTTCTCTTGGTTATGGATATAATAGAACTATGAACAAACCCAAATCTCCATCCCCAGATTCATTAGATGAGACTACAGTCTCCGAAGGGACACTGGCAATATGA 3612 0.4316 MNMDMAGSLPQSRVLHGGVGTSYKRRSVGQLGCFDFRGRDFGCASFGDSRSVSRLRRSGMNVSACWNNSRVVTGREFKVLNPKRSLSCKNNNLFMGSRVIWSKCQGNDSLAYVNGNGRNVDYVEGSGEDAGLGPVSSAELDAPLEEEEEGQAERKEGGSEIGLEELSVDELKELLQKASKELEVAKINSTMFEEKVKKISETAISLHDEAVNSWNNVNSTLDTIQEIENEEHTAKEAVQNATMALSLAEARLQVAIETLEAAKEVLDSAQGSNESNGDKDMVEEEQALLVAQEDIKECQANLANCEAELRRLQDKKEEVQKEVSKLQEIAEKAQLKAVKAEEDVTNIMLMAEQAVAFELEATKCVNDAEIALQRADKSNSNSNADTIETTQAQDVGAVSEVEKVVQGFSGDVVERHRDLAIDGESLLANLSPETLSDKTSQILEDRTQSDYLSDNENAVQTKKQETQKELTRDSSPFAPKALLKKSSRFFSASFFSSAEDGTEFTPASVFQGLVLSVQKQLPKLIFGLLLMGAGVAFYSNRVERNAQLLPQADVIMTSVEEVSSSAKPLVRQLQKLPKKIKKIIASLPHQEVNEEEASLFDMLWLLLASVIFVPIFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAVAEFGVVFLLFNIGLELSVERLSSMKKYVFGFGSAQVLATAVAVGLIAHYICGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITAIIAGGRLLLRPIYKQVAENQNAEIFSANTLLVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSNFPVIMGALGLLICGKTILVCLMGRMFGISLISAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQLSSLLFLVVGISMAITPWLAAGGQLIASRFEQNDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAVGRALDLPVYFGDAGSREVLHKVGAERACAAAITLDTPGANYRTVWALSKYFPNVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLSQAKLPTSEIAATINEFRSRHLAELTELCEASGSSLGYGYNRTMNKPKSPSPDSLDETTVSEGTLAI* 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1988 1203 Coils Coil 224 265 - -
Gso18g1988 1203 Coils Coil 161 188 - -
Gso18g1988 1203 MobiDBLite consensus disorder prediction 141 160 - -
Gso18g1988 1203 Gene3D - 1003 1167 - -
Gso18g1988 1203 Gene3D - 595 983 IPR038770 -
Gso18g1988 1203 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 3 1203 - -
Gso18g1988 1203 MobiDBLite consensus disorder prediction 446 460 - -
Gso18g1988 1203 Coils Coil 281 343 - -
Gso18g1988 1203 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 3 1203 - -
Gso18g1988 1203 MobiDBLite consensus disorder prediction 446 473 - -
Gso18g1988 1203 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1004 1145 IPR036291 -
Gso18g1988 1203 ProSiteProfiles RCK N-terminal domain profile. 1007 1129 IPR003148 GO:0006813
Gso18g1988 1203 Pfam Sodium/hydrogen exchanger family 605 975 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso18g1988 1203 MobiDBLite consensus disorder prediction 1178 1203 - -
Gso18g1988 1203 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 606 886 IPR004771 GO:0006812|GO:0008324|GO:0016021
Gso18g1988 1203 Pfam TrkA-N domain 1008 1121 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1988 Gso-Chr18 52480774 52495166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1988 3 1203 Inorganic Solute Cotransporters AT4G00630 67.154 0.0 1445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1988 - - gmx:100798822 2163.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1988 18 52480774 52495166 Gso9g2159 9 45863348 45876985 GST
Gso18g1988 18 52480774 52495166 Gso7g0644 7 6849171 6860141 PCT
Gso18g1988 18 52480774 52495166 Gso3g0115 3 1382630 1395042 PCT
Gso7g0644 7 6849171 6860141 Gso18g1988 18 52480774 52495166 PCT
Gso3g0115 3 1382630 1395042 Gso18g1988 18 52480774 52495166 PCT