Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1969 ATGGCAAAGAGGTGCCAAAGATTCCCTGTGAATTATGAGAAAGATCAGTCAGGATGTATGTGGGGTTTTATTAGTATATTTGACTTTCGTCATGCCCGCTTTACTCGGAAGTTGATTGCGGATAGGAGGCATGGCAGCAAGCATGCTGTTGGTGCTGCACTTACCAAGAACAAGTTTGAAGTGTTGAGCAATTTGGATGAAGAATATGAAGGCAATTTTGACAGAGGAGAGAGTAAGAGACTAACACTGACAAATGATGCAGATAAGCTTAGTGTGAAGAAACTCATAGAAGAAGAGATGATCATTGACCAGGATGAAATAAAGGACCAAGGTAATGCTGAAGTAGAATCAAAGCAATCCAGATTAGGGCATGAAGGCCCCCCAAAGACAGATTCCAAAAGAAAAAAGAAATCTCGCAAGAAAAGCCGTGATATGGATAGCCATGATTTGAATTCAGATGCAACCTTGAAATCTGAATTTTCACATAAACCGCATTCAAGACAACAGTCAAAAGATAATCTAGATTTGAACAAAATAATGGATGATTTTTGTCATGTTGAAGCTGCTTGTTCCATGATGAATGATGATCATGGCAAAATTGATGAACAGTCAAACCAAAAGCATGTTATCTCTGAAAACCTAGCTAATGCAATCCATGAATTTGCAAATCAGATGAGATTGAATGGGAAAGATCTGCCTGAAGATGGACAATTGCTTAGCTCACATGAACTCATGGAAGCACTTCAGGTTATAAGTTCAGATAAGCAATTGTTTCTTAGACTTCTACAAGACCCTAATTCACACTTATTGAAATACATTCAGGAGTTGGAAAATGCTCAAGGGAGAGGTGGCAAAGAATGCAGTTCAGTTACCAGCTCCAACTGCTCTGAACATGAACTTGTTAAACTGAAACAAACTAGGGAGACTGCCAACCGCAAGCATCGTAACTTTTTCAGGAAAAGGGTGAAGTCTCAACCAAAAGATTCAACAAATGAAAATGAGAAAACTGAATTTTCAAATAGAATTGTCATTTTGAAACCTGCCCTAACAGGCATGCAAATTTCTGAAAGTGGAAACAACCTTGCCTCAACGCTAAATTCTCATGACATCGCCCAGTACAAAAATCCTTCAGTGAGAGTTGGTTCACATTTTTCTCTTACAGAGATAAAAAGGAAATTGAAATGTGCTATGGGAAAGGAGAGGCATGGAAACCCTGAATTGATCCCACGCAAACTCCCCGTTGAACGTCAAAATAAGCTGCCAAGAGGAAAATGCAAAGATAATGCTGGAATGAGATCTCCTAATAAAGACCATTTCTTCATTGAAAAAATTACAAGACCAATGTTTAATGTAGTGAAAGGAAACAAGACCGGTACAATGAAAGACTCTGAATTGAATGTGGAACATGAAAGTGGTATTCCCAATCAAAGTGTTTCTAACATATATATTGAGGCTAGGAAACATCTGTGTGAGATGCTAGATAATGCTGATGAGAACACAAACATTTCAAGCAGGCAGATGCCCAAAACCCTTGGGAGAATACTTTCTCTTCCCGAGTACAACTTTTCAAGTCCTGGAAGGGATTTAGAGCATCATTCCGTGACTGCACAGGCAAGATTTTCTTCCTCAGACAAAACTAGGGAGGTTAGTGAGGATAAGTTGTCCCCCAAACCAGCAACACGTATTGGTCTTCCAGATCAGGAAATTAACAATTCAGAGAAGCAGTCAAGCATTTGTGATGAAAGATCTGACAATAAAGTTCAAGAAATTAAGTTGGTGTCGAATCTCTCCCATGATGTTAATCATGTCAATACATCTGAAGCCTGTTATCCTGTTAGAGATGAGATAGTTACTGAAGGTAATGTAGAATCTACAAAAGAGAAAAATGATTTGGAATCGTCTTTGGATCCAAATGGTTTCATCATAGGAAAGGACCAAAATATTGATATCTCAGAAATTCCTGATGGTGCAGGATGTTCTGAATGTTTGAATCAGATTCTTCTACAGGACATACCAGAAGAGAACCAATCATCATCTCTACTGTCATCTCCTCAATCTTCCATCACTAAGAAAATTGAAGAGCTAGAAAATGGTACAGATGTATCTGGGCGACCGAGTCCTGTATCTGTTCTTGATACATCATTTTCAGATGATGACTTTGGCCCTGGGCACTCCAGATATCAACCTGTTAAATTACCAGTACAACCTCTACAAATTAAATTTGAAGAGCACGACTCTTCACCTGCAGAACAATTTGATAGAAGAAAATATTGTTTTGAAGAAAGTGAATTGATATATGACTACATCAAAGCTGTCTTGCATGCCTCTGGCTTAACTACAGATCAGTTGTTGATGAAATGCCTTTCCTCAGACAAGATACTGGATCCTTCCTTGTTTGATCAGGTAGAGCTCTTCTCGAACCTGCTTTGCAACAATCAGAAGCTCCTATTTGACTCTATCAATGAAGTTCTCATGGAGATTTGTCAGCATTACTTTGGGGCCTCACCTTGGGTTTCGTTTGTAAATCCTAGCACAAGGCTAACTCCAAGTATGAAAAGGGTTACTTTAAAGGTCTGGGAAGGAGTGTGCTGGCATATGCTTCCCTTGCCCCCACCACGCACTTTAGAGCAAATTGTTAGGAAAGACATGGCAAGAAGGGGGACATGGATGGACCTTGGACTTGACACGGAAACAATTGGTTTTGAGATGGGTGAGGCCATTCTTGCTGAACTGATGGAAGACACCATTTTGAGCCTTGTGATTGAAAGTCCAGAAAGTAAATGTTTCTCTGCTTCAATTTGA 2802 0.3944 MAKRCQRFPVNYEKDQSGCMWGFISIFDFRHARFTRKLIADRRHGSKHAVGAALTKNKFEVLSNLDEEYEGNFDRGESKRLTLTNDADKLSVKKLIEEEMIIDQDEIKDQGNAEVESKQSRLGHEGPPKTDSKRKKKSRKKSRDMDSHDLNSDATLKSEFSHKPHSRQQSKDNLDLNKIMDDFCHVEAACSMMNDDHGKIDEQSNQKHVISENLANAIHEFANQMRLNGKDLPEDGQLLSSHELMEALQVISSDKQLFLRLLQDPNSHLLKYIQELENAQGRGGKECSSVTSSNCSEHELVKLKQTRETANRKHRNFFRKRVKSQPKDSTNENEKTEFSNRIVILKPALTGMQISESGNNLASTLNSHDIAQYKNPSVRVGSHFSLTEIKRKLKCAMGKERHGNPELIPRKLPVERQNKLPRGKCKDNAGMRSPNKDHFFIEKITRPMFNVVKGNKTGTMKDSELNVEHESGIPNQSVSNIYIEARKHLCEMLDNADENTNISSRQMPKTLGRILSLPEYNFSSPGRDLEHHSVTAQARFSSSDKTREVSEDKLSPKPATRIGLPDQEINNSEKQSSICDERSDNKVQEIKLVSNLSHDVNHVNTSEACYPVRDEIVTEGNVESTKEKNDLESSLDPNGFIIGKDQNIDISEIPDGAGCSECLNQILLQDIPEENQSSSLLSSPQSSITKKIEELENGTDVSGRPSPVSVLDTSFSDDDFGPGHSRYQPVKLPVQPLQIKFEEHDSSPAEQFDRRKYCFEESELIYDYIKAVLHASGLTTDQLLMKCLSSDKILDPSLFDQVELFSNLLCNNQKLLFDSINEVLMEICQHYFGASPWVSFVNPSTRLTPSMKRVTLKVWEGVCWHMLPLPPPRTLEQIVRKDMARRGTWMDLGLDTETIGFEMGEAILAELMEDTILSLVIESPESKCFSASI* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1969 933 MobiDBLite consensus disorder prediction 107 174 - -
Gso18g1969 933 MobiDBLite consensus disorder prediction 107 132 - -
Gso18g1969 933 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 933 - -
Gso18g1969 933 MobiDBLite consensus disorder prediction 142 174 - -
Gso18g1969 933 Pfam Domain of unknown function (DUF4378) 767 914 IPR025486 -
Gso18g1969 933 MobiDBLite consensus disorder prediction 526 582 - -
Gso18g1969 933 Pfam Protein of unknown function (DUF3741) 223 267 IPR022212 -
Gso18g1969 933 PANTHER (, RELATED) 1 933 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1969 Gso-Chr18 52235396 52242039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1969 1 902 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 32.863 3.98e-106 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1969 - - gmx:100782204 1825.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1969 18 52235396 52242039 Gso9g2137 9 45670182 45676785 GST
Gso18g1969 18 52235396 52242039 Gso7g0614 7 6536729 6542899 PCT
Gso18g1969 18 52235396 52242039 Gso3g0080 3 884715 891309 PCT
Gso7g0614 7 6536729 6542899 Gso18g1969 18 52235396 52242039 PCT
Gso3g0080 3 884715 891309 Gso18g1969 18 52235396 52242039 PCT