Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1965 ATGGGTGAGGACAAAACCACACAACTCCCCAGAAGAATGACCAGGTCTTCAGCTTCATCTTCTGCATCCACTTCAAATAACGTAGCTGCAGCAAAAGTAACTTGCCTTGAACCTCTAACAATTAATGACCTTTTAGTCGGAGGAGATCCCATCAGTCTCAACGACATAATATCTAGCTTTCCTGGTAGAAGTAGCCAGATTCTTGAGGTCGTGCGTCATTTGGGACCTTTGAATTCACCAATCCTTCCTTTGTTTGTGTATGGAAGTTCTTCTACTGGAAAAACCAGTATCATTCTTCAATTATTCAGGCATCTCAACAGGCCTATTGTTTATTCTAGTTGTAGGACATGTTATAACCAGAACATCTTGTTTGAATCTATTCTAAATCAGCTACTTCTCCATAGAAAAAATGCTGCCAATGGTTATTCGAATGCAAAACGCTGTGAAAGACCATCTGATTTTGTCAATTTTCTTCGAGAAGCGTTGACCAATGTTATAAACAATCTGAAGAAGTCAGAGAAGTTGATCTCAAATGAGATGACACAAGGGAAAATTGGAAATATGATCTACTTGGTGTTTGACAATTTTCAGCTTGTTAGGGAGTGGGATAAGAGTTCAACTATATTGCCCTTGCTGTTTAATCTCTATGATCTGCTAAATATGCCTGAGGTGGGTTTGATTTTTATCAGCAGTACTTCTCCAGATACCTTTTACTCTAACATGGGTTATGTGGAGCCTATCCCCATTTACTTTCCTGATTACACAGAAGAAGATATTCGTCAAATATTATTGAGAAACCAAGTGAACCAGAAGCTATATTCCTCATTTCTGGATGTATCTCTGAAGTCTTTCTGTGGAATTACTAAGCAGATTGATCATTTATCTGCTGCCTTAAAGCCACTATATGAAAAGTATTGTGAGCCTTTAAGTGATAAGGGAAAGGGAGTTGCTCCTAATCAAGAAATGAAGCGAAGGCTGCTTGCTCATATCAACCCTCATATTGCCTCCTCTTTGAATGAGATATTTAAGGTTTCATCTCTTTCTTCAACTGAAGTTGAGATCCGTAAAGAGGAAAAGCGGAAGGGAAATAATAGGAGATTGGAGCAATCTGAAGAACTTGGCAGTCTTGATTTTCATGTATCTACTAGTGCAAAATATCTTCTGATTTCAGCATTCCTTGCCTCCAGAAACCCAGCAACTCTTGATGCTTCACTTTTTGATTCCAAAGGTGGTTCTGATAATCGGAAGCGAAAGAGGAAGCCCTCTGAGAAAGCACAGGAACGGAAGGAAACTTTAGAACAGGAACTACTAATGAAAGGACCTGGAACTTTCCCACTGGAGAGGTTGTTAGCCATCTTTCAATGCCTTGTATCAGTTGCAGAAGAACCATCTGACGAGCAGGAGCAAAATAATGATGGATTAGGAGTTGAAGGTGGCAATGGTGGACTGATGTCTGATGTTCTTTTACAGCTATCCAGTCTCTGCAATGCTAATTTTATATTCAAAGGAAGGAGCTGTCCCATTGAAGGCTCAATGCGGTATCGAACAACCATATCTGAAGACCTTGCTCTGAAGGTTGCAAGGAGCTTAAAGTTCCCATTATCAAAGTATTTGTATAGGAGTTAG 1626 0.3967 MGEDKTTQLPRRMTRSSASSSASTSNNVAAAKVTCLEPLTINDLLVGGDPISLNDIISSFPGRSSQILEVVRHLGPLNSPILPLFVYGSSSTGKTSIILQLFRHLNRPIVYSSCRTCYNQNILFESILNQLLLHRKNAANGYSNAKRCERPSDFVNFLREALTNVINNLKKSEKLISNEMTQGKIGNMIYLVFDNFQLVREWDKSSTILPLLFNLYDLLNMPEVGLIFISSTSPDTFYSNMGYVEPIPIYFPDYTEEDIRQILLRNQVNQKLYSSFLDVSLKSFCGITKQIDHLSAALKPLYEKYCEPLSDKGKGVAPNQEMKRRLLAHINPHIASSLNEIFKVSSLSSTEVEIRKEEKRKGNNRRLEQSEELGSLDFHVSTSAKYLLISAFLASRNPATLDASLFDSKGGSDNRKRKRKPSEKAQERKETLEQELLMKGPGTFPLERLLAIFQCLVSVAEEPSDEQEQNNDGLGVEGGNGGLMSDVLLQLSSLCNANFIFKGRSCPIEGSMRYRTTISEDLALKVARSLKFPLSKYLYRS* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1965 541 Pfam AAA ATPase domain 60 221 IPR041664 -
Gso18g1965 541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 267 IPR027417 -
Gso18g1965 541 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 249 538 IPR020796 GO:0000808|GO:0005634|GO:0006260
Gso18g1965 541 MobiDBLite consensus disorder prediction 409 429 - -
Gso18g1965 541 MobiDBLite consensus disorder prediction 403 429 - -
Gso18g1965 541 Gene3D - 60 240 IPR027417 -
Gso18g1965 541 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 52 540 IPR020796 GO:0000808|GO:0005634|GO:0006260
Gso18g1965 541 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1965 Gso-Chr18 52158012 52161927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1965 3 540 Core DNA Replication Machinery Family AT4G29910 57.222 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1965 K02607 - gmx:100784340 1021.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1965 18 52158012 52161927 Gso9g2133 9 45614944 45618497 GST