Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso18g1949 | ATGGGTTTTCCCGTAGGGTACCCGGAGCTGCTGGTTCCGAAAATGTTCCTCCACGCGCTTTCCCTCCTCGCGTGGCTGCGCTCCCTCGTCTTCGCCCTCTTCCGCCTCCTCCGCATCTCCGACCTCCTCGACACCGATTCCGCCGCCTCTGACCTCCCTCCGCCGCCTCCGCCACGCGAGCCGACTCTCTCCGCCCTCCTCATCCGCGAGTTTCTCCCCGTGGCGGCGTTCCGCGACCTGGCAGCCGCCGACGGGGATCCTCCGCCGTCGGGCTGCGCCGTGTGCCTGAGCGAATTCTCCTCGGAAGAAGAAATCCGGTGTATGGCGAACTGCAAGCACATTTTCCACCGGTGGTGCGTGGACCGTTGGGTCGATCACGATCAGAAGACGTGTCCGCTCTGCAGAACTCCGTTTGTGCCGCATCACAAGCTCGAAGAATACAATCAGCGACTGTGGGCAGCTTCTGGAGTTTCACAGTTTTACTACCAAGACGATTACACGGCTTCTCTCTGA | 513 | 0.616 | MGFPVGYPELLVPKMFLHALSLLAWLRSLVFALFRLLRISDLLDTDSAASDLPPPPPPREPTLSALLIREFLPVAAFRDLAAADGDPPPSGCAVCLSEFSSEEEIRCMANCKHIFHRWCVDRWVDHDQKTCPLCRTPFVPHHKLEEYNQRLWAASGVSQFYYQDDYTASL* | 171 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso18g1949 | 170 | ProSiteProfiles | Zinc finger RING-type profile. | 92 | 135 | IPR001841 | - | |
Gso18g1949 | 170 | SMART | ring_2 | 92 | 134 | IPR001841 | - | |
Gso18g1949 | 170 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 168 | - | - | |
Gso18g1949 | 170 | Pfam | Ring finger domain | 92 | 135 | IPR001841 | - | |
Gso18g1949 | 170 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 140 | IPR013083 | - | |
Gso18g1949 | 170 | PANTHER | ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN | 1 | 168 | - | - | |
Gso18g1949 | 170 | SUPERFAMILY | RING/U-box | 85 | 145 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso18g1949 | Gso-Chr18 | 51998363 | 51999171 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso18g1949 | 1 | 168 | C3H Transcription Factor Family | AT1G63840 | 43.529 | 1.29e-47 | 150 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso18g1949 | K16281 | - | gmx:100813224 | 331.643 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso18g1949 | 18 | 51998363 | 51999171 | Gso9g2118 | 9 | 45472893 | 45473695 | GST | |
Gso18g1949 | 18 | 51998363 | 51999171 | Gso7g0591 | 7 | 6266251 | 6267042 | PCT | |
Gso18g1949 | 18 | 51998363 | 51999171 | Gso16g0279 | 16 | 3147852 | 3148576 | PCT | |
Gso7g0591 | 7 | 6266251 | 6267042 | Gso18g1949 | 18 | 51998363 | 51999171 | PCT | |
Gso16g0279 | 16 | 3147852 | 3148576 | Gso18g1949 | 18 | 51998363 | 51999171 | PCT |