Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1924 ATGGAAAGCCAAGACCCACCAAACCCACCACCCCAAAACAACCCCTTCCTCTTCACGCCAAATTCGATGTTGCAAAGCCCTAATTTGGACCCTCAAGAGCAATTAGGGCTATGTGACATTGACTGGGGTAACCTTTTCTCTGCTCAAAACAGCTTCTTGCTTAATGGGGATGCCAACGATGCAATTGAATGTGCTTCTTCTTCTTCTTTTGTGGCTCAAAATAAGGTAGCTTGTGAAGAGGAAAAGGGAAACAAGGAGAAAAGGAAAGGTGGGAGGATGAAGAAAACAACACGAGTGCCAAGGTTTGCGTTTCAAACGAGAAGTGCAGATGATATTTTGGATGATGGTTATCGCTGGAGGAAATATGGTCAGAAAGCTGTGAAGAATAACACATATCCAAGAAGCTACTACCGCTGCACGCATCACACGTGCAATGTGAAGAAACAAGTGCAAAGGCTATCCAAAGACACAAGCATTGTGGTGACGACTTACGAGGGAATTCACAACCACCCGTGCGAGAAGTTGATGGAAACTCTAACCCCTCTCCTCAAGCAAATACAGTTTCTTGCCAGCTTGTAA 579 0.4491 MESQDPPNPPPQNNPFLFTPNSMLQSPNLDPQEQLGLCDIDWGNLFSAQNSFLLNGDANDAIECASSSSFVAQNKVACEEEKGNKEKRKGGRMKKTTRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNNTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1924 192 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 25 188 - -
Gso18g1924 192 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 25 188 IPR044810 GO:0003700
Gso18g1924 192 MobiDBLite consensus disorder prediction 1 30 - -
Gso18g1924 192 Pfam WRKY DNA -binding domain 114 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g1924 192 Gene3D WRKY domain 98 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso18g1924 192 ProSiteProfiles WRKY domain profile. 108 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g1924 192 MobiDBLite consensus disorder prediction 1 16 - -
Gso18g1924 192 SMART WRKY_cls 113 172 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso18g1924 192 SUPERFAMILY WRKY DNA-binding domain 106 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1924 Gso-Chr18 51637720 51639623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1924 86 192 WRKY Transcription Factor Family AT5G41570 73.832 2.04e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso18g1924 WRKY 2.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1924 - - gmx:100127398 365.155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1924 18 51637720 51639623 Gso9g2096 9 45254780 45256620 GST
Gso18g1924 18 51637720 51639623 Gso16g0256 16 2931007 2933566 PCT
Gso16g0256 16 2931007 2933566 Gso18g1924 18 51637720 51639623 PCT