Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1914 ATGATGAGGCCTAAGCTTAACTTTGTGTTTCCATTTCCATTCATGCTCCTCATTACTCACTGGTTTCTATTGGCTCTTCATGGCAGTGCTGAGACTTCCACATATATAGTCCACATGGACAAATCCCTTTTTCCTCATGTTTTCACAACCCATCATGATTGGTTTGAATCCACCATTGATTCCATAAAATCAGCAAAACTTGGTCACTCATCTAACCAATCACAGAAACTAGTGTACTCCTATAACCATGCCATGTATGGTTTTAGTGCTGTACTAACATTAGAAGAGTTGGAGGCTGTTAAGAACTCTCATGGCTTTGTTGCAGCATATCCAGACAGAAATGTCACCATAGACACCACTCACACTTCTGAATTTCTCTCCCTAGACTCTTCTAGTGGCCTATGGCATGCCTCAAATTTTGGGGAGGATGTCATTGTAGGTGTTATTGACACTGGTGTGTGGCCTGAGAGTGAAAGCTTTAAAGATGAAGGAATGACTAAGAAAATTCCAAACAAATGGAAAGGGACCTGTGAGGAAGGACAAGACTTCAACACTTCCATGTGCAACTTCAAACTAATTGGAGCTAGATATTTCAACAAAGGTGTGATTGCTGCAAATTCCAAGGTAAAAATCAGCATGAACTCAGCTAGAGACACCGTGGGTCATGGAACTCACACATCATCAACAATTGCTGGCAACTATGTTCATGGAGCCTCTTACTTTGGCTATGCTAAAGGGGTGGCTAGAGGCATTGCCCCAAGAGCTAGGCTTGCCATGTACAAGGTCATTTTTGACGAGGGTCGTGTAGCCTCAGATGTTTTGGCTGGAATCGACCAAGCCATTGCTGATGGAGTTGATGTGATTTCCATCTCTATGGGGTTTGATGGTGTTCCACTTTATGAGGACCCTATAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGGTGGTTTCATCTTCTGCTGGTAATGAAGGTCCTGATCTTGGTACCTTGCACAATGGAATCCCCTGGCTTCTGACTGTAGCTGCAGGCACCATAGACCGCACATTTGGTACTCTAATTCTTGGAAATGGACAAACCATTATTGGTTGGACCTTGTTTCCAGCAAATGCCTTGGTGGAAAATCTTCCACTTATCTACAATAAGAATATATCAGCATGTAACTCAGTCAAGCTTTTATCCAAAGTGGCCAAACAAGGGATCATTCTATGTGACTCAGAGTCAGACCCTGAGTTAAAGATGAACCAAAGGAGTTTTGTTGATGAAGCCAGTTTGTTAGGGGCAGTGTTTATCTCTGATCAACCTCTATTAAATGAAGAAGGACATGTTTCCTCTCCAACTATTGTAATCAGCTCACAGGATGCACCATCTGTGATCAAGTATGCAAAAAGCCATAAGAAGCCAACAGCCACCATCAAATTTCAACGAACATTTGTTGGAATAAAGCCAGCACCAGCTGTTACCATTTACTCTTCAAGAGGTCCTTCACCAAGCTATCATGGGGTCTTGAAGCCTGACATAATGGCACCTGGCTCTAATGTTCTTGCTGCTTATGTTCCTACAGAACCAGCAGCAACAATTGGCAACAATGTGATGTTATCCAGTGGCTACAATTTGCTGTCTGGAACATCCATGGCATGCCCTCATGCTTCTGGTGTTGCTGCTCTTTTGAAAGCTGCACACACTAAATGGAGTGCTGCTGCTATAAGGTCTGCACTAGTAACCACAGCTAGTCCTCTTGATAATACACAAAATCCAATTAGGGACTATGGTTACCCTTCTCAATATGCTTCCCCTCTTGCCATTGGAGCTGGTCAAATTGACCCCAACAAAGCACTTGATCCAGGTTTAGTATATGATGCCACCCCACAGGACTATGTTAATCTCCTTTGTGCTTTGAAGTACACACAAAAGCAAATCCTAACCATTACAAGATCAACATCTTACAATTGTGCAAAACCATCGTTTGATCTTAATTACCCTTCATTTATAGCTTTCTATCGCAACAACACAAGGTCAGTTGTTCACAAGTTTAGGAGGACAGTGACCAATGTTGGAGATGGTGCTGCCACATACAGAGCCAAGGTGACACAACCAAAAGGCTCTGTGGTGACGGTGTCACCTGAGACATTAACATTCAGATATAAAAATGAGAAGCTGAGCTACGATGTTGTGATAAAGTATAGCAAGTACAAGAAGAAAAATATATCATTTGGGGATCTTGTTTGGGTTGAAGAAGGTGGAACACACAGTGTTAGGAGTCCCATTGTAGTGGCACCAAGTGGAATTGTATGA 2298 0.4252 MMRPKLNFVFPFPFMLLITHWFLLALHGSAETSTYIVHMDKSLFPHVFTTHHDWFESTIDSIKSAKLGHSSNQSQKLVYSYNHAMYGFSAVLTLEELEAVKNSHGFVAAYPDRNVTIDTTHTSEFLSLDSSSGLWHASNFGEDVIVGVIDTGVWPESESFKDEGMTKKIPNKWKGTCEEGQDFNTSMCNFKLIGARYFNKGVIAANSKVKISMNSARDTVGHGTHTSSTIAGNYVHGASYFGYAKGVARGIAPRARLAMYKVIFDEGRVASDVLAGIDQAIADGVDVISISMGFDGVPLYEDPIAIASFAAMEKGVVVSSSAGNEGPDLGTLHNGIPWLLTVAAGTIDRTFGTLILGNGQTIIGWTLFPANALVENLPLIYNKNISACNSVKLLSKVAKQGIILCDSESDPELKMNQRSFVDEASLLGAVFISDQPLLNEEGHVSSPTIVISSQDAPSVIKYAKSHKKPTATIKFQRTFVGIKPAPAVTIYSSRGPSPSYHGVLKPDIMAPGSNVLAAYVPTEPAATIGNNVMLSSGYNLLSGTSMACPHASGVAALLKAAHTKWSAAAIRSALVTTASPLDNTQNPIRDYGYPSQYASPLAIGAGQIDPNKALDPGLVYDATPQDYVNLLCALKYTQKQILTITRSTSYNCAKPSFDLNYPSFIAFYRNNTRSVVHKFRRTVTNVGDGAATYRAKVTQPKGSVVTVSPETLTFRYKNEKLSYDVVIKYSKYKKKNISFGDLVWVEEGGTHSVRSPIVVAPSGIV* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1914 765 SUPERFAMILY Subtilisin-like 119 618 IPR036852 GO:0004252|GO:0006508
Gso18g1914 765 Pfam Peptidase inhibitor I9 34 117 IPR010259 -
Gso18g1914 765 PANTHER OS01G0868800 PROTEIN 34 760 - -
Gso18g1914 765 ProSiteProfiles Serine proteases, subtilase domain profile. 122 614 - -
Gso18g1914 765 Pfam Subtilase family 141 590 IPR000209 GO:0006508|GO:0008236
Gso18g1914 765 CDD Peptidases_S8_3 115 579 IPR034197 -
Gso18g1914 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 117 IPR037045 -
Gso18g1914 765 Gene3D Peptidase S8/S53 domain 143 627 IPR036852 GO:0004252|GO:0006508
Gso18g1914 765 Gene3D - 631 761 - -
Gso18g1914 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Gso18g1914 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 760 IPR045051 -
Gso18g1914 765 CDD PA_subtilisin_like 353 473 - -
Gso18g1914 765 Gene3D - 348 480 - -
Gso18g1914 765 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Gso18g1914 765 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Gso18g1914 765 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Gso18g1914 765 Pfam Fibronectin type-III domain 658 759 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1914 Gso-Chr18 51558296 51560770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1914 15 762 Subtilisin-like Serine Gene Family AT5G67090 43.155 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1914 - - gmx:100779169 1516.9