Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1913 ATGGAGCTTTTTCACAACCTCAACATTTTCAGCACAATTCTGCTCCTATGCATGTTTCCTCACTCACTCAAGTGCCAACAAGCATACCTCAATGGCACTGTCTATGACTGTTCTGATAACCCTTCAGCACCAAAAGGGTATCTTTGCAATGGCCTTCAGAAGTCATGCACCTCCTTCTTACTTTTCAGGTCAAAACCTCCCTATGATAGCCCTGGGATAATTGCTTACCTTCTTGGCTCTGAGGCATCTACCATAGCCTCAATCAACAGGATCTCAAGAAATGACAAGATTCCTTCCAATAAGTCAATCATTGTTCCTGTGTTCTGTTCATGTTCAGGAAACATCTACCAGCATAACACACCTTACACTGCCAGCAAGAATGACACCTACTATGAGTTGGTAAAAGAAACCTTCCAAGGCCTCACCACATGTCAGGCTATGATGGGTCAGAATTACTATGCTTCAATCAACATTGCAATTGGTGCTGAGCTCACAGTTCCAATGTTGTGTGCTTGTCCAACTGAAAATCAGACAGCAAGAGGGGTCACCTCTTTGCTGGTTCACTTGGTGAACTATGGTGACACTATTAAGTCCATAGGAAGGGCCTATGGTGTGGATGAACAAAGTGTGCTAGAGGCCAATAAGTTGGCAGTTTCACAAAGTAAAAACAGCAGCATGGACCTCCTTGCCTTGACACCTATTATAGTTCCTCTAATAGGGAAGAGCTGCAAAGAGAACCCAGATAAATTCTATTGTAGATGTTACCAAGCACCAGATGGAAGCTCCAAGGGGCCCTTCTGTGATGAATCTGATGGTCAGAAATTCCCTGCCAAATTGGTTGCTGGTTTAGGAGTTGGAATTGGTGCAGGCTTTTTGTGTTTGTTTCTTTTGGGGTACAAGTCATATCAATACATACAGAAAAAGAGAGAAACTATCCTTAAGGAAAAGTTATTCAGGCAAAATGGTGGCTACTTGTTACAAGAGAAGCTCTCTTCTTATGGAAATGGAGAAATGGCAAAGCTTTTTACAGCTGAGGAGCTGCAAAGAGCAACAGATAACTACAATAGGAGCAGGTTTCTTGGTCAAGGTGGTTATGGCACAGTGTACAAAGGAATGTTACTAGATGGAACCATTGTTGCAGTTAAAAAGTCAAAAGAGATTGAAAGGAACCAGATACAGACTTTTGTCAATGAAGTAGTCGTATTATCTCAGATCAACCACAGGAACATTGTAAAACTATTAGGTTGTTGTCTTGAGACAGAAACTCCAATACTAGTCTATGAATTCATTCCCAATGGAACACTGTCCCATCACATACATAGGAGAGACAATGAACCCTCCCCTTCATGGATTAGTCGCCTTAGAATTGCATGTGAGGTTGCTGGAGCAGTGGCATACATGCATTTTGCAGCATCTATTTCCATTTTCCATAGAGACATCAAACCCACCAACATACTTTTAGACAGTAACTACAGTGCCAAAGTGTCTGATTTTGGAACATCAAGATCAGTTCCACTAGATAAGACTCATTTAACCACAGCTGTTGGAGGAACTTTTGGATACATAGACCCTGAATATTTTCAGTCTAGTCAATTTTCAGATAAGAGTGATGTGTATAGTTTTGGAGTTGTGCTTGTAGAGCTCATAACTGGGAGAAAGCCAATTTCATTCTTATATGAAGATGAGGGTCAGAATTTGATTGCACAATTCATTTCTTTGATGAAGGAGAACCAAGTTTTTGAAATTTTAGATGCCAGTTTGCTTAAGGAAGCAAGGAAAGATGACATTCTTGCCATTGCAAATCTTGCAATGAGATGCTTGAGGCTGAATGGGAAGAAAAGACCAACAATGAAAGAGGTTTCAACAGAATTGGAAGCATTGAGAAAGGCACAAAGTTCATTACAGATGAACCATGATCATGAGCACACAACTAGTGACATAGTTCAAGAATGCACAGAGGAAAGCATGTCACTGCCCTTACATCTAGAGTTTACATCCTTTTAG 2004 0.4082 MELFHNLNIFSTILLLCMFPHSLKCQQAYLNGTVYDCSDNPSAPKGYLCNGLQKSCTSFLLFRSKPPYDSPGIIAYLLGSEASTIASINRISRNDKIPSNKSIIVPVFCSCSGNIYQHNTPYTASKNDTYYELVKETFQGLTTCQAMMGQNYYASINIAIGAELTVPMLCACPTENQTARGVTSLLVHLVNYGDTIKSIGRAYGVDEQSVLEANKLAVSQSKNSSMDLLALTPIIVPLIGKSCKENPDKFYCRCYQAPDGSSKGPFCDESDGQKFPAKLVAGLGVGIGAGFLCLFLLGYKSYQYIQKKRETILKEKLFRQNGGYLLQEKLSSYGNGEMAKLFTAEELQRATDNYNRSRFLGQGGYGTVYKGMLLDGTIVAVKKSKEIERNQIQTFVNEVVVLSQINHRNIVKLLGCCLETETPILVYEFIPNGTLSHHIHRRDNEPSPSWISRLRIACEVAGAVAYMHFAASISIFHRDIKPTNILLDSNYSAKVSDFGTSRSVPLDKTHLTTAVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVELITGRKPISFLYEDEGQNLIAQFISLMKENQVFEILDASLLKEARKDDILAIANLAMRCLRLNGKKRPTMKEVSTELEALRKAQSSLQMNHDHEHTTSDIVQECTEESMSLPLHLEFTSF* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1913 667 SMART serkin_6 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1913 667 Coils Coil 617 637 - -
Gso18g1913 667 Gene3D Phosphorylase Kinase; domain 1 327 429 - -
Gso18g1913 667 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 652 IPR045274 GO:0007166
Gso18g1913 667 CDD STKc_IRAK 360 627 - -
Gso18g1913 667 Gene3D Transferase(Phosphotransferase) domain 1 430 653 - -
Gso18g1913 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Gso18g1913 667 PANTHER LYSM TYPE RECEPTOR KINASE 26 652 - -
Gso18g1913 667 Pfam LysM domain 189 217 IPR018392 -
Gso18g1913 667 ProSiteProfiles Protein kinase domain profile. 354 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1913 667 ProSitePatterns Protein kinases ATP-binding region signature. 360 383 IPR017441 GO:0005524
Gso18g1913 667 SUPERFAMILY Protein kinase-like (PK-like) 337 624 IPR011009 -
Gso18g1913 667 Pfam Protein kinase domain 354 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1913 Gso-Chr18 51549974 51553147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1913 284 631 Receptor kinase-like Gene Family AT1G16130 58.000 5.84e-141 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gso18g1913 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1913 - - gmx:100795455 1329.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1913 18 51549974 51553147 Gso9g2087 9 45178926 45181924 GST