Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1903 ATGTTCAAATTCCTGAAAGAGGTCGTTGGCGGATCTGGCACCGGCGTCAAGGATCTCCCTTACACCATCGCTGAATCTTACCCTTCTGCTTGGGGCTCTTGGACTCATTCTCGCGGCACCTCCAAGGATGACGGTTCTCCTGTCTCGGTGTTCTCACTCTCCGGCTCCAATGCTCAGGATGGTCACTTAGCTGCTGCACGCAATGGTGTCAAGCGTCTTCGAACTGTCAGGCATCCGAATATCTTGTCGTTTCTTCACAGCACTGAGATTGAGACGTATGATGCAGGTTCTCCTAAGGTTACAATATATATTGTGACCGAGCCTGTGATGCCACTATCTGAGAAGATCAAGGAGTTAGGGCTTGAAGGTACACAAAGGGATGAATATTATGCTTTGGGTCTTCATCAAATAGCTAAAGCTGTGAGCTTCTTGAATAATGATTGTAAACTTGTTCATGGCAACGTTTGCATGGCTAGTGTCGTTGTGACACCAACTTTGGACTGGAAGCTTCATGCTTTTGATGTTCTATCAGAGTTTGATGGGAGCAGTGAAATGTCTTCTGGCCAAATGCTGCAATATGCATGGCTTGTTGGATCACAATACAAACCAATGGAGTTGGCAAAATCAGACTGGGATGCAATTAAGAAGTCTCCTCCATGGGCCATAGATTCTTGGGGCATGGGTTGCCTAATCTATGAGGTATTCTCTGGATTGAGGTTGGGCAAAACAGAGGAGTTACGCAACATTGGTTCCATTCCGAAGTCTCTGCTTCCAGATTACCAACGACTATTGAGTTCCATGCCCTCTCGTAGATTAAATACATCAAAGCTTATAGAAAACAGCGAATATTTTCAAAATAAGTTGGTAGACACGATACATTTCATGGAAATTCTCAGTTTGAAAGATAGTGTAGAGAGAGACACCTTCTTCCGCAAGCTTCCAAATTTAGCTGAGCAACTTCCTCGCCAGATAGTGTTGAAGAAGTTACTTCCTTTATTAGCTTCTGCCCTTGAATTTGGTTCAGCTGCTGCCTCAGCTTTGACTGCATTGTTGAAAATGGGTTCCTGGCTTTCAGCTGAGGAGTTTAATGTCAAGGTACTTCCAACAATTGTAAAACTCTTTGCCTCCAATGATCGAGCTATACGAGTTGCCCTTCTTCAACATATTGATCAATATGGAGAGTCTTTATCAGCACAAGCTGTTGATGAACAAGTTTACCCTCATGTTGCTACTGGGTTCTCCGATACATCTGCTTTTCTCAGGGAACTGACTCTTAAGTCTATGTTAATTCTGGCTCCAAAGTTGTCTCAAAGGACAATGTCAGGGTCATTATTGAAGTATCTGTCAAAGTTGCAGGTTGATGAAGAGCCAGCAATTAGAACAAATACTACCATATTATTAGGCAATATTGGAAGTTACTTAAACGAAGGAACAAGAAAAAGAGTTTTGATTAATGCATTTACAGTCCGTGCATTACGTGATACTTTTCCACCTGCTAGAGGAGCAGGCATTATGGCTTTATGTGCCACCAGTTCCTACTATGACATCACTGAAGTTGCAACCCGGATTCTTCCTAATGTTGTTGTGCTCACAATTGATCCTGACAGTGATGTTAGAACTAAGGCATTTCAAGCTGTTGATCAGTTTTTGCAGATAGCAAAGCAACATTATGAAAAGACAAATGCAGCAGATACCACTGGTGTTGCAGGTGTGGGAAGCTCATCTGTTCCAGGAAATGCTAGTTTGCTTGGGTGGGCTATGAGTTCTTTGACCTTGAAGGGTAAACCTTCTGATCATGCTCCAGTTGCTTCTGCAAGTTCAACTGCAATTACTTCAACATCTTCTAATGGCACCGCAGGTATAGAGACGCCATCAACAGCACCAGCCCGTGTAAACTCTACCTCAGATTTGGCTGAACACCCTGTGCCTACGTCTCCTACATCAACGGATGGCTGGGGGGAACTTGAGAATGGAATTGATGAGGAGCATGGAAGTGACAGGGATGGGTGGGATGATCTGGAACCACTTGAAGAGTCAAAGCCAGCTCTTGCAAACATTCAAGCAGCTCAAAGGCGGCCTGTTTCTCAACCTATTTCACATACAAAACAAGCCTCGAATTTGCTATCAAAAAGTACACCAAAATTGAACAAGGATGAGGATGATGATTTGTGGGGATCTATAGCTGCTCCTGCTCCAAAAACTGCAAGACCTTTAAATTTGAAATCAGCTCAAACTGATGATGATGATCCTTGGGCTGCCATTGCTGCTCCAGCACCCACGACCAAGGCCAAACCCTTATCGACTGGCAGAGGTAGGGGAGCCAAACCTGCTGCTCCAAAATTAGGTGCTCAGCGTATAAACCGGACATCATAA 2373 0.4404 MFKFLKEVVGGSGTGVKDLPYTIAESYPSAWGSWTHSRGTSKDDGSPVSVFSLSGSNAQDGHLAAARNGVKRLRTVRHPNILSFLHSTEIETYDAGSPKVTIYIVTEPVMPLSEKIKELGLEGTQRDEYYALGLHQIAKAVSFLNNDCKLVHGNVCMASVVVTPTLDWKLHAFDVLSEFDGSSEMSSGQMLQYAWLVGSQYKPMELAKSDWDAIKKSPPWAIDSWGMGCLIYEVFSGLRLGKTEELRNIGSIPKSLLPDYQRLLSSMPSRRLNTSKLIENSEYFQNKLVDTIHFMEILSLKDSVERDTFFRKLPNLAEQLPRQIVLKKLLPLLASALEFGSAAASALTALLKMGSWLSAEEFNVKVLPTIVKLFASNDRAIRVALLQHIDQYGESLSAQAVDEQVYPHVATGFSDTSAFLRELTLKSMLILAPKLSQRTMSGSLLKYLSKLQVDEEPAIRTNTTILLGNIGSYLNEGTRKRVLINAFTVRALRDTFPPARGAGIMALCATSSYYDITEVATRILPNVVVLTIDPDSDVRTKAFQAVDQFLQIAKQHYEKTNAADTTGVAGVGSSSVPGNASLLGWAMSSLTLKGKPSDHAPVASASSTAITSTSSNGTAGIETPSTAPARVNSTSDLAEHPVPTSPTSTDGWGELENGIDEEHGSDRDGWDDLEPLEESKPALANIQAAQRRPVSQPISHTKQASNLLSKSTPKLNKDEDDDLWGSIAAPAPKTARPLNLKSAQTDDDDPWAAIAAPAPTTKAKPLSTGRGRGAKPAAPKLGAQRINRTS* 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1903 790 ProSiteProfiles HEAT repeat profile. 523 561 IPR021133 -
Gso18g1903 790 PANTHER - 1 789 - -
Gso18g1903 790 ProSiteProfiles Protein kinase domain profile. 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1903 790 Gene3D - 282 561 IPR011989 -
Gso18g1903 790 SUPERFAMILY ARM repeat 293 552 IPR016024 -
Gso18g1903 790 MobiDBLite consensus disorder prediction 601 652 - -
Gso18g1903 790 Gene3D Transferase(Phosphotransferase) domain 1 109 280 - -
Gso18g1903 790 MobiDBLite consensus disorder prediction 656 674 - -
Gso18g1903 790 SUPERFAMILY Protein kinase-like (PK-like) 38 287 IPR011009 -
Gso18g1903 790 PANTHER SCY1-RELATED S/T PROTEIN KINASE-LIKE 1 789 - -
Gso18g1903 790 ProSiteProfiles HEAT repeat profile. 366 404 IPR021133 -
Gso18g1903 790 MobiDBLite consensus disorder prediction 594 674 - -
Gso18g1903 790 Gene3D Phosphorylase Kinase; domain 1 12 107 - -
Gso18g1903 790 MobiDBLite consensus disorder prediction 689 712 - -
Gso18g1903 790 MobiDBLite consensus disorder prediction 687 790 - -
Gso18g1903 790 SMART serkin_6 2 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1903 Gso-Chr18 51441259 51452328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1903 70 291 MAP Kinase Kinase Kinase AT5G66850 24.576 2.95e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK SCY1_SCYL1 Gso18g1903 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1903 K08876 - gmx:100782748 1484.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1903 18 51441259 51452328 Gso9g2077 9 45103208 45112946 GST