Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1881 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCACCCCAATTCACCAAATTCATCATCTTTCAGGAAGAGCAAGAGCAACTCCAAGAAGAGGCTTGGATCAAGAACCTCTTCATTTGAGTATTGGAGGAATGAGCCTCTACATAGGATCCCTGGGAGGATCTTCCTCAATGGCTCATCCCAAGTTGCATCCTTGTTCACTCAACAAGGGAAGAAGGGTACCAACCAGGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGACAAGATACTATTTTCTGTGGAGTTTTTGATGGCCACGGTCCATATGGTCACATGGTTGCGAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATGTCCATTGGGAACAAAGTGCATCTGGTGAAGAAGTCCTCAAGGAGATTAGCGTTAATACTGCAGGAAGCATGAATTCAGAAGAGGCTGCATTTGCATCTGCTGATGATGAATCCAGGGTATCTGTTGATGCCGAGGAAACAGAAAAACACCCAGAAATCTTTCAGACACTTAAAGATTCCTTTTTGAAGGCATTCAAAGTTATGGATAGAGAACTGAAGACCCACCAAAGTATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTCTGGTTAAGCAGGGACATGATCTTATTATTGGAAATGTTGGTGACTCTAGAGCTGTGCTGGGTACAAGAGAGAAAGACAATTCTCTTGTTGCCATCCAGTTAACTGTGGATCTAAAACCCAATCTTCCAGCCGAAGAAGAGAGAATTCGCAAATGTAAAGGGCGTGTTTTTGCTCTTCAGGATGAACCTGAAGTTGCTCGAGTCTGGTTGCCAAACAATGACTCACCTGGCCTTGCCATGGCAAGGGCATTTGGAGATTTTTGTCTTAAAGATTTTGGCCTGATATCTGTTCCCGAAGTGTCATACAGACGACTCACTGAGAAGGACGAATTTGTTGTCTTGGCAACAGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATCGTGGCAGCCGCGCCAAGGCGTGCCTCGGCCGCACGGGCGCTGGTCGAGTCAGCGGTTCGCTCATGGAGGTACAAGTATCCAACCTCCAAAGTGGACGACTGTGCCGTGGTTTGCCTCTTTCTGGACTCGGATTCGCACAAAGTGTGTAGTGCTTCCAATGTCATCAAGTCCAAGGAACAACCTAGTTCAGGTATCCAAGTCCACAATGGCGACAACGGAGATGTTCCTGCACCTACTGGTCTGGCAAGGTCAGGAACTTGCAGGGAAAACAATGAAGATAACAACAACAACCACAACCACAACCATAAGGAAGAGGAAATAGATACTGATGCAGAAATAGAGTGGTCTGCTCTCGAAGGAGTGTCGCGTGTGAACACATTACTAAACCTCCCAAGGTTTGAACCTGACAACAAAGACAAGGGGATGAGAAAACACAAATGA 1464 0.4617 MGSCFSAESRSPHPNSPNSSSFRKSKSNSKKRLGSRTSSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSRQDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNVHWEQSASGEEVLKEISVNTAGSMNSEEAAFASADDESRVSVDAEETEKHPEIFQTLKDSFLKAFKVMDRELKTHQSIDCFCSGTTAVTLVKQGHDLIIGNVGDSRAVLGTREKDNSLVAIQLTVDLKPNLPAEEERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFVVLATDGIWDVLSNKEVVDIVAAAPRRASAARALVESAVRSWRYKYPTSKVDDCAVVCLFLDSDSHKVCSASNVIKSKEQPSSGIQVHNGDNGDVPAPTGLARSGTCRENNEDNNNNHNHNHKEEEIDTDAEIEWSALEGVSRVNTLLNLPRFEPDNKDKGMRKHK* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1881 487 MobiDBLite consensus disorder prediction 1 24 - -
Gso18g1881 487 MobiDBLite consensus disorder prediction 434 450 - -
Gso18g1881 487 MobiDBLite consensus disorder prediction 401 452 - -
Gso18g1881 487 Pfam Protein phosphatase 2C 110 360 IPR001932 -
Gso18g1881 487 SMART PP2C_4 54 380 IPR001932 -
Gso18g1881 487 PANTHER ALPHABET, ISOFORM E-RELATED 1 463 - -
Gso18g1881 487 CDD PP2Cc 62 382 IPR001932 -
Gso18g1881 487 ProSiteProfiles PPM-type phosphatase domain profile. 63 382 IPR001932 -
Gso18g1881 487 MobiDBLite consensus disorder prediction 1 33 - -
Gso18g1881 487 Gene3D - 58 384 IPR036457 -
Gso18g1881 487 SUPERFAMILY PP2C-like 56 383 IPR036457 -
Gso18g1881 487 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1881 Gso-Chr18 51266445 51270898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1881 1 476 PP2C-type Phosphatase Gene Family AT3G02750 61.597 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1881 - - gmx:100790373 930.243
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1881 18 51266445 51270898 Gso9g2055 9 44931058 44935611 GST