Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1876 ATGTGTGGAATATTTGCGTATCTGAATTACAACCTCAACAGAGAGAGACAATACATCTTGCAGGTTCTCTTCAATGGCTTGAGGAGATTGGAGTACCGCGGATACGATTCCGCAGGCATCGCAATCGACGATTCCTCTTCTTCTCAATTCTCTCTTTCGCCTCCTCCTCTGGTTTTCCGTCAGGAAGGAAACATCGAATCGCTCGTCAAATCCGTCTATCAAGAAGTGGGAGAAACTGAACTGAACTTGGGGGAATGCTTCGGCACGCACGCGGGAATCGCGCACACTCGCTGGGCGACTCACGGAGAGCCTGCGCCGCGGAACAGTCACCCTCAGAGCTCTGGTCATGGGAACGAGTTCTTGGTTGTTCACAATGGAGTCATCACTAATTACGAGGTTTTGAAGGAGACGCTGCTTAGACATGGCTTCACCTTTGAATCTGAAACTGACACCGAGGTCATCCCCAAGCTTGCCAAGTTTGTCTACGACAAGGCGAATGAAGCGTCCGGAGGTCAGGTTGTTACCTTCAGTCAAGTTGTTCTTGAAGTTATGAGGCATCTTGAAGGAGCTTATGCCCTTATTTTCAAAAGTCCACATTATCCTAATGAATTGATTGCCTGCAAGCGTGGTAGCCCACTGCTGCTAGGTGTTAAAGAATTGGCAGAAAATAAAGAACATGGTTCAGCATTTGAGGATAACAAATTCCTATCAAAAGATGGAAAGCCCAGAGAATTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAGCATACAAAGAAAGTGCTAGTTATTGAGGATGGTGAAGTAGTTCATCTCAAGGATGGTGGGGTTTCTATTTTGAAATTTGAGAATGACATGGGAGAACATGGTGCTTCTCTTTCCAGAGCTTTCTCCGTGCGACGTGCATTATCTGTTCTTGAGATGGAGGTTGAGCAAATAAATAAAGGTAATTATGAGCATTACATGCAAAAGGAAATTCATGAGCAGCCAGAGTCTCTAACAACCACAATGAGGGGGAGGCTTATACATCGAGGATCTAACAAATCCAAGTCTGTTCTGCTGGGAGGGCTGAAGGATCACCTCAAAACAATTAGGCGAAGTAGAAGGATACTTTTCATTGGTTGTGGTACAAGTTATAATGCTGCTTTGGCAGCTAGACCCATATTGGAAGAACTTTCAGGTGTTCCTGTTACTATGGAAATTGCTAGTGATCTATTGGATCGGGAGGGACCAATATACCGGGAGGATACTGCCGTTTTTGTTAGTCAATCTGGTGAAACTGCAGACACTTTACTTGCACTGCAATATGCTTTAGACAATGGTGCATTGTGTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAAGGCATACACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGGAGGCGATACAATTTCAAATCAAGCCAGAAGAGAAGCTATCATAGATGGTCTTTTTGATCTGCCAAATAAAGTCAGAGAGGTGCTGAAGCTTGATCTGGAGATGAAGGATCTAGCAAAGCAGTTGATTGCTGAGCAGTCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACTGCTCTTGAGGGAGCTTTGAAAGTAAAGGAAGTGGCTCTAATGCATAGTGAAGGGATACTTGCTGGTGAGATGAAGCATGGTCCTTTGGCATTAGTGGATGAAAATCTCCCAATTGTTGTTTTAGCTACCCGTGATGCCTGCTTCAGCAAACAGCAGTCTGTTATTCAGCAACTTAATGCCCGCAGAGGTCGTCTGATAGTTATGTGTTCAAAAGGGGATGCTTCCTCTGTATGCCCTAATGAATCTTGTAGGGTAATTGAAGTTCCACTAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTCGACCAGCCTCGTAATCTTGCCAAGAGTGTCACAACGCAATAA 2055 0.4418 MCGIFAYLNYNLNRERQYILQVLFNGLRRLEYRGYDSAGIAIDDSSSSQFSLSPPPLVFRQEGNIESLVKSVYQEVGETELNLGECFGTHAGIAHTRWATHGEPAPRNSHPQSSGHGNEFLVVHNGVITNYEVLKETLLRHGFTFESETDTEVIPKLAKFVYDKANEASGGQVVTFSQVVLEVMRHLEGAYALIFKSPHYPNELIACKRGSPLLLGVKELAENKEHGSAFEDNKFLSKDGKPRELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGGVSILKFENDMGEHGASLSRAFSVRRALSVLEMEVEQINKGNYEHYMQKEIHEQPESLTTTMRGRLIHRGSNKSKSVLLGGLKDHLKTIRRSRRILFIGCGTSYNAALAARPILEELSGVPVTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMVMLALAIGGDTISNQARREAIIDGLFDLPNKVREVLKLDLEMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVLATRDACFSKQQSVIQQLNARRGRLIVMCSKGDASSVCPNESCRVIEVPLVEDCLQPVINVVPLQLLAYHLTVLRGHNVDQPRNLAKSVTTQ* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1876 684 CDD SIS_GlmS_GlmD_2 527 682 IPR035490 -
Gso18g1876 684 ProSiteProfiles SIS domain profile. 531 674 IPR001347 GO:0097367|GO:1901135
Gso18g1876 684 Pfam SIS domain 535 666 IPR001347 GO:0097367|GO:1901135
Gso18g1876 684 Pfam SIS domain 364 491 IPR001347 GO:0097367|GO:1901135
Gso18g1876 684 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 275 IPR017932 -
Gso18g1876 684 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 293 IPR029055 -
Gso18g1876 684 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 1 684 - -
Gso18g1876 684 CDD GFAT 2 272 - -
Gso18g1876 684 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 281 IPR029055 -
Gso18g1876 684 ProSiteProfiles SIS domain profile. 360 499 IPR001347 GO:0097367|GO:1901135
Gso18g1876 684 CDD SIS_GlmS_GlmD_1 369 494 IPR035466 -
Gso18g1876 684 Pfam Glutamine amidotransferase domain 87 195 - -
Gso18g1876 684 Gene3D - 520 669 - -
Gso18g1876 684 Gene3D - 316 683 - -
Gso18g1876 684 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 684 - -
Gso18g1876 684 SUPERFAMILY SIS domain 315 683 IPR046348 GO:0097367|GO:1901135
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1876 Gso-Chr18 51218606 51225088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1876 21 216 PRT Gene Family AT2G16570 26.500 6.79e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1876 K00820 - gmx:100792835 1322.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1876 18 51218606 51225088 Gso9g2050 9 44887276 44893177 GST