Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1864 ATGGGGTCTATGAATTTGTTAGGTTTTTCTCTCTCTCCTCAAGAACACCCTTCTAGTCAAGATCACTCTCAAACGGCACCTTCTCGTTTTTGCTTCAACCCTGATGGAATCTCAAGCACTGATGTAGCAGGAGACTGCTTTGATCTCACTTCTGACTCAACTCCTCATTTACTCAACCTTCCCTCTTACGGCATATACGAAGCTTTTCATAGGAGCAACAATATTCACACCACTCAAGATTGGAAGGAGAACTACAACAGCCAAAACTTGCTATTGGGAACTTCATGCAGCAACCAAAACATGAACCACAACCATCAGCAACAACAACAACAACAGCCAAAGCTTGAAAACTTCCTCGGTGGACACTCATTTGGTGAACATGAGCAACCCTACGGTGGTAACTCAGCCTCTACAGAATACATGTTCCCGGCTCAGCCGGTATTGGCCGGTGGCGGCGGCGGTGGTAGCAATAGCAGCAACACAAGCAACAGTAGCTCCATAGGGTTATCCATGATAAAGACATGGTTGAGGAACCAACCACCACACTCAGAAAACAACAATAACAACAACAATGAAAGTGGTGGCAATAGTAGAAGCAGTGTGCAGCAGACTCTATCACTTTCCATGAGTACTGGTTCACAATCAAGCACATCACTACCCCTTCTCACTGCTAGTGTGGATAATGGAGAGAGTTCTTCTGATAACAAACAACCACATACCACGGCTGCACTTGATACAACCCAAACCGGAGCCATTGAAACTGCACCCAGAAAGTCCATTGACACTTTTGGACAGAGAACTTCTATCTACCGTGGTGTAACAAGGCATAGGTGGACGGGGAGGTATGAGGCTCACCTGTGGGATAATAGTTGTAGAAGAGAGGGACAAACTCGCAAAGGAAGGCAAGTTTACTTGGGAGGTTATGACAAAGAAGAAAAGGCAGCTAGAGCCTACGATTTGGCAGCACTAAAATACTGGGGAACAACTACGACAACAAATTTTCCAATTAGCCACTATGAGAAAGAGTTGGAAGAAATGAAGCACATGACTAGGCAAGAGTACGTTGCGTCATTGAGAAGGAAGAGTAGTGGGTTTTCTCGCGGGGCATCCATTTATCGAGGTGTGACGAGACACCATCAACATGGAAGATGGCAAGCGAGGATTGGAAGAGTTGCTGGCAACAAGGATCTCTACTTGGGAACTTTCAGCACCCAAGAGGAGGCAGCAGAAGCATATGATGTAGCAGCAATCAAATTCAGAGGACTAAGTGCTGTTACAAACTTTGACATGAGCAGATATGACGTGAAAAGCATACTTGAGAGCACCACTTTGCCAATTGGTGGTGCTGCAAAGCGTTTGAAGGATATGGAGCAGGTGGAACTGAGGGTGGAGAATGTTCATAGAGCAGATCAAGAAGATCATAGTAGCATCATGAACTCTCACTTAACTCAAGGAATCATTAACAACTATGCAGCAGGAGGAACAACAACGACTCATCATCATAACTGGCACAATGCTCTTGCATTCCACCAACCTCAACCTTGCACCACCATACACTACCCTTATGGACAAAGAATTAATTGGTGCAAGCAAGAACAAGACAACTCTGATGCCTCTCACTCTTTGTCTTATTCAGATATTCATCAACTACAGCTAGGGAACAATGGCACACACAACTTCTTTCACACAAATTCAGGGTTGCACCCTATGTTAAGCATGGATTCTGCTTCCATTGACAATAGCTCTTCATCTAACTCTGTTGTTTATGATGGTTATGGAGGTGGTGGGGGCTATAATGTGATTCCTATGGGGACTACTACTACTGTTGTTGCAAATGATGGTGATCAAAATCCAAGAAGCAATCATGGTTTTGGTGATAATGAGATAAAGGCACTTGGTTATGAAAGTGTGTATGGTTCTACAACTGATCCTTATCATGCACATGCAAGGAACTTGTATTATCTTACTCAACAGCAACCATCTTCTGTTGATGCAGTGAAGGCTAGTGCATATGATCAAGGATCTGCATGCAATACTTGGGTTCCAACTGCTATTCCAACTCATGCACCAAGGTCTAGTACTAGTATGGCTCTCTGCCATGGTGCTACGCCCTTCTCTTTATTGCATGAATAG 2133 0.4421 MGSMNLLGFSLSPQEHPSSQDHSQTAPSRFCFNPDGISSTDVAGDCFDLTSDSTPHLLNLPSYGIYEAFHRSNNIHTTQDWKENYNSQNLLLGTSCSNQNMNHNHQQQQQQQPKLENFLGGHSFGEHEQPYGGNSASTEYMFPAQPVLAGGGGGGSNSSNTSNSSSIGLSMIKTWLRNQPPHSENNNNNNNESGGNSRSSVQQTLSLSMSTGSQSSTSLPLLTASVDNGESSSDNKQPHTTAALDTTQTGAIETAPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPISHYEKELEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLSAVTNFDMSRYDVKSILESTTLPIGGAAKRLKDMEQVELRVENVHRADQEDHSSIMNSHLTQGIINNYAAGGTTTTHHHNWHNALAFHQPQPCTTIHYPYGQRINWCKQEQDNSDASHSLSYSDIHQLQLGNNGTHNFFHTNSGLHPMLSMDSASIDNSSSSNSVVYDGYGGGGGYNVIPMGTTTTVVANDGDQNPRSNHGFGDNEIKALGYESVYGSTTDPYHAHARNLYYLTQQQPSSVDAVKASAYDQGSACNTWVPTAIPTHAPRSSTSMALCHGATPFSLLHE* 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1864 710 MobiDBLite consensus disorder prediction 1 30 - -
Gso18g1864 710 Pfam AP2 domain 269 327 IPR001471 GO:0003700|GO:0006355
Gso18g1864 710 Pfam AP2 domain 371 421 IPR001471 GO:0003700|GO:0006355
Gso18g1864 710 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 5 627 - -
Gso18g1864 710 MobiDBLite consensus disorder prediction 152 257 - -
Gso18g1864 710 SUPERFAMILY DNA-binding domain 370 431 IPR016177 GO:0003677
Gso18g1864 710 MobiDBLite consensus disorder prediction 118 257 - -
Gso18g1864 710 CDD AP2 370 431 IPR001471 GO:0003700|GO:0006355
Gso18g1864 710 SUPERFAMILY DNA-binding domain 268 337 IPR016177 GO:0003677
Gso18g1864 710 ProSiteProfiles AP2/ERF domain profile. 371 429 IPR001471 GO:0003700|GO:0006355
Gso18g1864 710 ProSiteProfiles AP2/ERF domain profile. 269 335 IPR001471 GO:0003700|GO:0006355
Gso18g1864 710 PANTHER BNAC02G44180D PROTEIN 5 627 - -
Gso18g1864 710 PRINTS Ethylene responsive element binding protein signature 270 281 IPR001471 GO:0003700|GO:0006355
Gso18g1864 710 PRINTS Ethylene responsive element binding protein signature 411 431 IPR001471 GO:0003700|GO:0006355
Gso18g1864 710 SMART rav1_2 371 435 IPR001471 GO:0003700|GO:0006355
Gso18g1864 710 SMART rav1_2 269 341 IPR001471 GO:0003700|GO:0006355
Gso18g1864 710 Gene3D AP2/ERF domain 371 431 IPR036955 GO:0003700|GO:0006355
Gso18g1864 710 Gene3D AP2/ERF domain 269 337 IPR036955 GO:0003700|GO:0006355
Gso18g1864 710 CDD AP2 268 337 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1864 Gso-Chr18 51134389 51139175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1864 166 456 AP2-EREBP Transcription Factor Family AT5G17430 71.478 1.11e-138 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Gso18g1864 AP2 1.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1864 K09285 - gmx:100797584 1310.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1864 18 51134389 51139175 Gso9g2041 9 44820670 44825325 GST