Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1847 ATGAAGATGTTTATGGGTGGCCAAATTTTCGGTGCTGGTGTTATTATTGTTAGTTTCTTTCTGCTGATCCTCTGTGGCATGGTTTGTGGGACTGACAGTGATATATTCTGCTTGAAAAGTGTAAAGAGAACACTTGACGACCCCTACAATTATTTGCAATCCTGGAATTTCAATAACAATACAGAAGGGTATATATGCAAGTTTACTGGGGTTGAGTGTTGGCACCCTGATGAAAACAAGGTCTTGAATCTCAAACTGTCAAACATGGGACTCAAGGGCCCCTTCCCTCGCGGCATTCAGAATTGTTCAAGCATGACAGGATTAGATTTTTCGCTTAACAGACTCTCTAAAACCATTCCGGCCGATATATCCACACTTCTTACATTTGTGACAACCCTTGATCTTTCTTCAAATGATTTTACAGGGGAGATACCTGCATCCCTTTCAAATTGTACCTATCTTAATACAATTAGACTTGACCAAAACCAACTCACTGGTCAAATTCCTGCTAACTTGAGTCAGCTCCCGCGGCTTAAGTTGTTTAGTGTTGCCAATAATCTTTTGACAGGGCAAGTTCCAATCTTTGCAAATGGTGTAGCTAGTGCCAATAGTTATGCAAATAATTCAGGTCTGTGTGGTAAACCCTTATTGGATGCTTGCCAGGCCAAGGCTTCGAAGAGTAACACAGCTGTTATAGCTGGAGCAGCTGTTGGTGGTGTGACTGTTGCAGCATTAGGTTTGGGCATTGGAATGTTCTTCTACGTGCGCCGTATTTCTTATAGGAAGAAGGAAGAGGACCCTGAAGGAAACAAGTGGGCAAGAAGTCTAAAGGGAACTAAAACAATAAAGGTTTCTATGTTTGAGAAGTCAATTTCAAAAATGAACTTGAATGATCTCATGAAGGCTACTGATAACTTCGGCAAAAGCAATATTATTGGGACTGGAAGATCAGGAACTGTTTACAAAGCTGTCCTTCATGATGGCACATCACTCATGGTTAAGAGATTACAGGAATCTCAACATTCAGAGAAAGAATTTCTGTCTGAGATGAATATACTAGGTTCTGTCAAACATCGTAACTTGGTTCCGCTTTTAGGTTTTTGCGTGGCTAAAAAGGAGAGGTTTTTGGTCTATAAAAATATGCCAAATGGTACCCTCCATGATCAACTACACCCTGATGCTGGTGCATGCACCATGGATTGGCCTCTAAGGCTCAAAATTGCAATTGGAGCAGCCAAGGGATTAGCATGGCTTCATCATAGCTGCAATCCCCGCATTATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCTGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCTAGATTGATGAACCCAATTGATACACATTTGAGTACTTTTGTGAATGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCTGAATATACAAAAACTTTGGTGGCTACTCCTAAAGGGGATATTTATAGCTTCGGGACTGTGCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCCATGTGTCTAAAGCTCCAGAAACTTTTAAAGGAAATTTGGTAGAATGGATTCAACAGCAATCTAGCAATGCAAAACTCCATGAAGCCATTGATGAATCACTAGTTGGGAAGGGTGTAGACCAGGAGCTTTTCCAATTTCTGAAGGTTGCATGTAACTGTGTTACAGCAATGCCAAAGGAGAGGCCTACCATGTTTGAAGTATACCAGCTTCTAAGAGCCATTGGGATTAATTATAATTTCACAACTGAGGATGAGATCATGTTGCCTATGGACACTGGTGATGCTGATAACTTAGAAGAACTTATTGTAGCTCGAGAGGGACATGATTGA 1857 0.412 MKMFMGGQIFGAGVIIVSFFLLILCGMVCGTDSDIFCLKSVKRTLDDPYNYLQSWNFNNNTEGYICKFTGVECWHPDENKVLNLKLSNMGLKGPFPRGIQNCSSMTGLDFSLNRLSKTIPADISTLLTFVTTLDLSSNDFTGEIPASLSNCTYLNTIRLDQNQLTGQIPANLSQLPRLKLFSVANNLLTGQVPIFANGVASANSYANNSGLCGKPLLDACQAKASKSNTAVIAGAAVGGVTVAALGLGIGMFFYVRRISYRKKEEDPEGNKWARSLKGTKTIKVSMFEKSISKMNLNDLMKATDNFGKSNIIGTGRSGTVYKAVLHDGTSLMVKRLQESQHSEKEFLSEMNILGSVKHRNLVPLLGFCVAKKERFLVYKNMPNGTLHDQLHPDAGACTMDWPLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTKTLVATPKGDIYSFGTVLLELVTGERPTHVSKAPETFKGNLVEWIQQQSSNAKLHEAIDESLVGKGVDQELFQFLKVACNCVTAMPKERPTMFEVYQLLRAIGINYNFTTEDEIMLPMDTGDADNLEELIVAREGHD* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1847 618 Gene3D Ribonuclease Inhibitor 32 222 IPR032675 -
Gso18g1847 618 SUPERFAMILY Protein kinase-like (PK-like) 282 582 IPR011009 -
Gso18g1847 618 ProSiteProfiles Protein kinase domain profile. 306 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1847 618 PANTHER RECEPTOR-LIKE PROTEIN 55 15 595 - -
Gso18g1847 618 Gene3D Phosphorylase Kinase; domain 1 267 379 - -
Gso18g1847 618 Gene3D Transferase(Phosphotransferase) domain 1 381 596 - -
Gso18g1847 618 PANTHER LRR RECEPTOR-LIKE KINASE 15 595 - -
Gso18g1847 618 CDD STKc_IRAK 312 580 - -
Gso18g1847 618 Pfam Protein tyrosine and serine/threonine kinase 310 579 IPR001245 GO:0004672|GO:0006468
Gso18g1847 618 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Gso18g1847 618 SUPERFAMILY L domain-like 32 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1847 Gso-Chr18 50980669 50983776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1847 20 594 Receptor kinase-like Gene Family AT3G28450 45.017 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gso18g1847 PK_Tyr_Ser-Thr 6.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1847 - - gmx:100801294 1177.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1847 18 50980669 50983776 Gso9g2027 9 44697070 44700251 GST