Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1844 ATGGATTCTCTGTCTCTTCTTCTCTCCCCTTATCCACTCTCCACCAAAACCCACAAATTCAGCACCTTGAAACCCTTCTCTCATTTCTCAAACCCTAAAATACCACCTTCTCAACCCCATTCACCCTCTCTTTCTGCACTCCAAACACCTTCTCTTAACTCCCTCCAAAACCCATTAACAAAACCTTTCTTATCATTTACCATGCTCAACCTCTTCACTCCACTTCCCTGCCTCGCTGACGTAGCCTCCGACGACGCCGGAAAAATAAACCTGGAATCGGTGCTGGTTTCCATCGACAACTTCTTCAACCGGTACCCGTTTTTCGTCGCCGGTTGCACCTTTATTTGGCTGGTGGTGATTCCTCTGGCGGAAGAGTACTTGAAGAAGTGCAAGTTCGTGTTGGCGATTGACGCGTTCAGGAAGCTCCGCGATGACCCGAATGCGCAGCTGCTGGACATAAGGGACGAGAAGAACGTGAGGTTTCTGAAGTCTCCGAATTTGAAAATGTTCGAGAAGGAAGTGGCGCAGGTCGAGTTCGCTGAGGATGGGAACGAGGACGAGTTTGTGAAGAAGGTGTTGCGGAGGTTCAAGGACGCGCCTAACACTGTTGTATGTGTTTTGGACAGTTTTGACGGTAATTCCATGAAAGTTGCCGAGGTACTGTTCAAGAATGGTTTCAAAGAGGCCTATGCAATCAGAGGTGGAGTTAGAGGCCAGCAAGGTTGGATGGCTATACAGGATTCCCTTTTGCCCCCTTCTGTGCATATAAGGAAAAGGGTAAAAGCTTCAAAGAAACTCAATACAAATGGAAATGGAGCCATCCAGCAAAATGATAGTAACAATAATAGTTCCTTAACCCAAGATAGATCTTCTGTTGAAAACCAAACAACAGACGATGGTCATGTGAAAAGCTCTGTAGAGTCTATTTCAGAAGTGAAAACTGGTTCTGTAGCATCCTCCTCTCCTTATCCCAATTACCCGGATTTGAAGCCACCATCATCTCCAACTCCGTCAAAGCCACAATAG 1026 0.4649 MDSLSLLLSPYPLSTKTHKFSTLKPFSHFSNPKIPPSQPHSPSLSALQTPSLNSLQNPLTKPFLSFTMLNLFTPLPCLADVASDDAGKINLESVLVSIDNFFNRYPFFVAGCTFIWLVVIPLAEEYLKKCKFVLAIDAFRKLRDDPNAQLLDIRDEKNVRFLKSPNLKMFEKEVAQVEFAEDGNEDEFVKKVLRRFKDAPNTVVCVLDSFDGNSMKVAEVLFKNGFKEAYAIRGGVRGQQGWMAIQDSLLPPSVHIRKRVKASKKLNTNGNGAIQQNDSNNNSSLTQDRSSVENQTTDDGHVKSSVESISEVKTGSVASSSPYPNYPDLKPPSSPTPSKPQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1844 341 CDD RHOD 139 238 - -
Gso18g1844 341 MobiDBLite consensus disorder prediction 265 323 - -
Gso18g1844 341 MobiDBLite consensus disorder prediction 265 341 - -
Gso18g1844 341 MobiDBLite consensus disorder prediction 325 341 - -
Gso18g1844 341 Gene3D - 129 254 IPR036873 -
Gso18g1844 341 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 341 IPR044240 -
Gso18g1844 341 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4A, CHLOROPLASTIC 1 341 - -
Gso18g1844 341 ProSiteProfiles Rhodanese domain profile. 144 251 IPR001763 -
Gso18g1844 341 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 116 242 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1844 Gso-Chr18 50956270 50961059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1844 92 243 Sulfurtransferasese or Rhodanese AT4G01050 41.026 1.07e-24 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1844 - - gmx:100808729 633.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1844 18 50956270 50961059 Gso9g2025 9 44678900 44682643 GST