Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1843 ATGCAAACCTTCTTCTTGTACCTTTTCCTTTTCTTCTTGTTATGTGCACTTCACCAACTAGCCTCATCCCAACCCTTCTTCCTCAATAGAAGGATTCTCCATGAACCCTTTGTTCCTTTAACCACTCTTCCACCTTCTGAAGCACCAAAACCACAACCTTCTCCTTCAAGCCATAAACAAAAACCAAAACCCAAATATCCATCATCCACCATTCCCACAACCTCTACCACTACCACAACAATACCAACACCAACTACAACTACACCACAATCACCATTTTTCCCATTATACCCTTCTTCCCCACCACCTCCTTCTCCAATCACCTTTGCCTCCTTCCCTGCCAATATTTCCTCTCTCATTCTTCCTCACTCCCCCAAACCCAATTCTTCCTCCAACAAACTCCTCCCCGTCGCTCTCTCCGCCGTCGCCGCCGCGGTCCTTGCTATAATCATCTCTGCCGTCGTCTGTTACCGCCGTCGCCGGAGCCCTCCCCTCGCTGCCGACGGCAAACTTATCCGATCCGACACCGACCTCCGCCTGCTCCCGCGCAATACCGAAACCGCCGTGGAAACTCGCAAGCTCCGGCACACGTCTTCCACCAGCTCCGAGTTTCTTTACCTCGGAACTGTAGTTAACTCGCACGTAATTGAAGATGGCGCCGACGTCTCCGACGCCGGCGGCGACCGGAAAATGGAATCGCCGGAGCTCCGACCGCTTCCGCCGCTTGCGCGACAAGCTTCTTTGCCGCTGCCGACGTACGACGAGGCGGGGTTCACCACCGCGGAGGAGGAGGAGGACGATGAGGAGTTTTACTCTCCGAGAGGCTCATCGTTGGGAGGCTCCGGCGGAACCGGATCGGCTTCCCGGCGAATTTTCGCCACCGGAGGAAGAAGCGTGATCTCTAGTTCGTGCCCTTCCTCTTCTTCCGCCTCGCCGGAAAGGCCTCATTCTATCGCGACGGCGAGTTCGAGTTCCCGGAGAACCCAGCCAAAGTCGCCGGAAAATTACAACCACCAACACGTGCAATCTTCTCCTTCTTCTCCTTCGTTGTGCTCAACACCAGATAGGGTTTTCACTGAACATAATTCAAATGAAGCATTAAGTGCATGTTCACATGCACATGCAGCATCATCATCATCATCATTACATGAAGGAACATTGGAGAAAAATGAAGATGCATTATCATCATCATCATCATCATCACCACCACGAGCGCCACGGAGACTATCTAATGCTTCTTCGTCTTCGGCATTTTCTCTAACATCTTCGCTGGAGAAGGTAACACGTAATCACACTTTCGATCAGTCTCCAAGAATGTCGAGTGTCTCCGACGGACTAATGTTACCGGGTTTGTCATCAGTGCCTTTGTCACCCGCCCTATTGTCATCACCGGAAACCGAAAGAGGAACATTTAGTGGATTAAGAACAGGTTCTTTTGGTGCGGCTGCGACGCAGAGGAAACACTGGAATATTTCCGACATGTCACTAACACCACCCTTTGATGAAATTGGAACGGTTCCGGTTCCGGCTCCGGCTCCTCCACCTTTGCCACAGAGGAAGCACTGGGAGATTCCGGGCTCTGCTCCGCCACCGCCGCCACCATTGCCATGGCAAAGGAAGCAGTGGGGAGTGCCATCGCCGGCAATGAGGCCGTCGACACCGGTGTCAAGGCCGCCAGAATTGGTGCCTCCTTCGAGGTCTTTTGTGTTGCAAAACCAAGGAACCAATGTTGAGTTGCCGGCGAGTTTGGGGGAAATTGAAGAGATTAGTAAACCAAAATTGAAGCCCCTGCATTGGGACAAAGTGAGAACGACCTCTGATCGTGAAATGGTGTGGGATCAGATGAAGTCCAGCTCGTTTAAATTGAATGAGAAAATGATTGAAACATTGTTTGTAGTGAACACATCAAACCCAAAACCCAAGGACGCAACTACGAACTCAGTTTTTCACCTGCCAAATCAGGAGGAAAGAATACTTGATCCTAAAAAGTCTCAGAATATTTCAATCTTGCTGAAAGCACTTAATGTCACTATAGAAGAAGTGTGTGAAGCACTTTTAGAAGGAAGTACTGATACACTTGGAACAGAATTACTTGAAAGCTTATTAAGAATGGCACCAAGCAAGGAAGAAGAACGTAAGTTGAAGGAACATAAAGATGACTCACCAACTAAGCTTGGTCTAGCTGAAATTTTTTTGAAGGCAGTGCTTGATGTACCTTTCGCATTTAAAAGAATTGAAGCAATGCTTTACATAGCCAATTTTGAGTCTGAAGTGGAGTATCTTAGGACATCCTTTCAAACTCTAGAGGCTGCCTGTGAAGAGCTGCGACATTGTAGAATGTTCTTGAAGCTTTTGGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGGACCAACCGCGGGGATGCAGAGGCATTCAAACTTGATACTCTTCTCAAGCTGGCCGATGTCAAAGGCGCAGATGGCAAAACCACTCTACTGCATTTTGTTGTACAGGAAATTATTCGAACCGAAGGTGCTCGTCTCTCCAGAACTAATCAAACTCCAAGCTCTACTTTGAGTGAAGATGCCAAGTGTAGGAGGCTTGGCCTTCAATTTGTATCAAGCCTGAGTTCCGAGCTAGCAAATGTGAAGAAGGCTGCTGCTATGGATTCTGAAGTTCTCAACAGTGATGTCTTAAAACTTTCGAAAGGAATTGCAAGCATAGCAGAAGTTGTGCAATTAAACCAAACCATGGCATCAGATGAAAGCAGTCAGAAATTCACAGAATCAATGAACAAATTCATCAGAATGGCTGAGGAGGAAATTCCAAAAATTCAAGCCCAAGAAAGTGTTACTTCCACCCTTGTGAAGGAGATTACAGAGTATTTTCATGGAAATTTGACAAAGGAAGAAGCTCATCCATTTAGAATCTTCTTGGTTGTAAGAGACTTCCTAGCAGTTCTTGACCGGGTCTGCAAAGAAGTTGGAATGATAAATGAGAGAACTATGGTTAGTTCAGCTCATAAATTCCCTGTGCCAGTTAACCCTATGCTTCCACAACCCCTTCCTGGGTTACATGAGAGGCAACAGTATAATAACTCTTCAGATGATGATAGTTCTTCTTCATCACCATAG 3120 0.4747 MQTFFLYLFLFFLLCALHQLASSQPFFLNRRILHEPFVPLTTLPPSEAPKPQPSPSSHKQKPKPKYPSSTIPTTSTTTTTIPTPTTTTPQSPFFPLYPSSPPPPSPITFASFPANISSLILPHSPKPNSSSNKLLPVALSAVAAAVLAIIISAVVCYRRRRSPPLAADGKLIRSDTDLRLLPRNTETAVETRKLRHTSSTSSEFLYLGTVVNSHVIEDGADVSDAGGDRKMESPELRPLPPLARQASLPLPTYDEAGFTTAEEEEDDEEFYSPRGSSLGGSGGTGSASRRIFATGGRSVISSSCPSSSSASPERPHSIATASSSSRRTQPKSPENYNHQHVQSSPSSPSLCSTPDRVFTEHNSNEALSACSHAHAASSSSSLHEGTLEKNEDALSSSSSSSPPRAPRRLSNASSSSAFSLTSSLEKVTRNHTFDQSPRMSSVSDGLMLPGLSSVPLSPALLSSPETERGTFSGLRTGSFGAAATQRKHWNISDMSLTPPFDEIGTVPVPAPAPPPLPQRKHWEIPGSAPPPPPPLPWQRKQWGVPSPAMRPSTPVSRPPELVPPSRSFVLQNQGTNVELPASLGEIEEISKPKLKPLHWDKVRTTSDREMVWDQMKSSSFKLNEKMIETLFVVNTSNPKPKDATTNSVFHLPNQEERILDPKKSQNISILLKALNVTIEEVCEALLEGSTDTLGTELLESLLRMAPSKEEERKLKEHKDDSPTKLGLAEIFLKAVLDVPFAFKRIEAMLYIANFESEVEYLRTSFQTLEAACEELRHCRMFLKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLADVKGADGKTTLLHFVVQEIIRTEGARLSRTNQTPSSTLSEDAKCRRLGLQFVSSLSSELANVKKAAAMDSEVLNSDVLKLSKGIASIAEVVQLNQTMASDESSQKFTESMNKFIRMAEEEIPKIQAQESVTSTLVKEITEYFHGNLTKEEAHPFRIFLVVRDFLAVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLPGLHERQQYNNSSDDDSSSSSP* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1843 1039 Pfam Formin Homology 2 Domain 590 983 IPR015425 -
Gso18g1843 1039 PANTHER FORMIN-LIKE PROTEIN 1 9 1037 - -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 391 442 - -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 42 86 - -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 1010 1039 - -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 42 60 - -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 456 476 - -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 1021 1039 - -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 522 561 - -
Gso18g1843 1039 ProSiteProfiles Formin homology-2 (FH2) domain profile. 584 1009 IPR015425 -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 61 86 - -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 219 476 - -
Gso18g1843 1039 SMART it6_source 584 998 IPR015425 -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 295 384 - -
Gso18g1843 1039 MobiDBLite consensus disorder prediction 221 235 - -
Gso18g1843 1039 PANTHER FORMIN-RELATED 9 1037 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso18g1843 1039 MobiDBLite consensus disorder prediction 522 540 - -
Gso18g1843 1039 Gene3D Formin, FH2 domain 590 1004 IPR042201 -
Gso18g1843 1039 SUPERFAMILY Formin homology 2 domain (FH2 domain) 597 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1843 Gso-Chr18 50946469 50951423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1843 542 1025 FH2 protein (formin) Gene Family AT3G25500 70.648 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1843 - - gmx:100801837 1645.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1843 18 50946469 50951423 Gso9g2024 9 44671240 44676243 GST