Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1832 ATGGCCTCCCCTTCTTCCCCCACCGACTCCAACCCACCCTCTGCCGTCCCCCTCCCTCTCCCGGCGCCTCCCGCCACCTCCTCCCGCCGCCTTCCTCCGCCCTGCTGGACCCCGGAGGAAACCGCCGCCCTCATCGACGCCTACCGCGACAAATGGTACTCCCTCGGCCGCACCAACCTGAAGGCTACCCACTGGCAAGAGGTGGCCGACGCCGTCACCGCGCAGTGCCCCAACGCCTCCCCCACGGCGAAAACCGCCGTGCAGTGCCGCCACAAGATGGAGAAGCTCCGCAAACGCTACCGCACCGAAATCCAACGCCTCCGCAACCTCCCCTTCCCCCGCCTCAACAACGCTAACACCAATTCCCCTTCCTCGTGGGTCCACTTCAAATCCATGGACTCCATGGAAAAAGGCCCCAACCACAAACCCCACTCCGACATCAACAACAACCTCAATTTCCACGATGACGACGACGACGACTATCTGTACGAGGAATTCAAAACCGCCCCCGGATCCAACACCAACACGAGAAGCCTCAACAAGCTCTACAAGAACAACAACGGATTCAATTCGGGTGGCTCGGGCTCCGGATCCGGGTTTCGGATTCGGATCCCGGCCGGCGTGCCACAACAACAACATACGGCGTCGTCTAATAAGATTTTCAACAGCCATCTTCCTCCCGGGATAGTGCCACGTGGCGGAGGCGTGAAGAGGGAGCGTGAGAGGGACGCGGTGGCGGAGATGGTGGAGGCGATTAAGGTCCTTCGCGACGGGTTCGTGAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAGATCGAGAGCATGCGGATGGAGATGGAGATGAAGCGCACCGAGATGATCCTGGACTCGCAGCAGAGGATTGTTGAGGCTTTTGCTATGGCCGTTTCGCAGAAGAGGAGCAAGGGCAAGTCCACGCCCTCACCTTCATCGCAACCGTAG 963 0.6044 MASPSSPTDSNPPSAVPLPLPAPPATSSRRLPPPCWTPEETAALIDAYRDKWYSLGRTNLKATHWQEVADAVTAQCPNASPTAKTAVQCRHKMEKLRKRYRTEIQRLRNLPFPRLNNANTNSPSSWVHFKSMDSMEKGPNHKPHSDINNNLNFHDDDDDDYLYEEFKTAPGSNTNTRSLNKLYKNNNGFNSGGSGSGSGFRIRIPAGVPQQQHTASSNKIFNSHLPPGIVPRGGGVKRERERDAVAEMVEAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRIVEAFAMAVSQKRSKGKSTPSPSSQP* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1832 320 Pfam Myb/SANT-like DNA-binding domain 34 135 IPR044822 -
Gso18g1832 320 Coils Coil 266 286 - -
Gso18g1832 320 MobiDBLite consensus disorder prediction 1 35 - -
Gso18g1832 320 ProSiteProfiles Myb-like domain profile. 36 97 IPR001005 -
Gso18g1832 320 MobiDBLite consensus disorder prediction 10 31 - -
Gso18g1832 320 MobiDBLite consensus disorder prediction 218 237 - -
Gso18g1832 320 PANTHER ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE FAMILY PROTEIN 20 314 - -
Gso18g1832 320 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 20 314 IPR044823 -
Gso18g1832 320 Coils Coil 90 110 - -
Gso18g1832 320 SMART 118neu2 43 140 IPR006578 -
Gso18g1832 320 Gene3D - 36 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1832 Gso-Chr18 50867870 50869704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1832 35 135 Trihelix Transcription Factor Family AT3G14180 33.663 2.99e-15 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso18g1832 Myb_DNA-bind_4 3.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1832 - - gmx:100807518 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1832 18 50867870 50869704 Gso9g2015 9 44610021 44610989 GST