Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1822 ATGCTCCTCAGTTACTCTCTGCACCTCCCAATTACATCTTCTTACTCACACACCTCCAACCGCAGTCCCAACTCGAGCGGTTACATAAAGTTCCGAACAAGGTACCGCGAAAACCTGCGATACCTGCGAGCCTTAACCATAATCGACCCAAAAACCAAACCAGAGGACCTTCCTCTCCCCAACGACGTCGACCACATCATCGACACTCTCACATTCCTCAAGTCGCACTCTTTCTCCGACGCCGACATCCCTCGCCTCAAGTTCCTGACCCCTGAGCTCTTCACCACCGCCGTCGTCCCCTCCGACGTCTCCGCCGTGTTCCGCTTCCTCGCCGACGACCTCGCCGCCACGAAATCCGAGTCCCGCGACCTCATCCTCCGATGCCCCAAACTCCTCTTCTCACACGTCGACCTCTGCCTCCGACCCACGCTCCAATTTCTCCGGCAGGGGCTGAACCGGCCAACGACAAGGAACGCGCACCTGCTGAACACGCGCGTAGACAAGCTGCATGCGAAAGTTGAGTTCTTGCAAGAGTTGGGGTTTTCGTACGAGGAGGCTGTCAGGGCTTGTGCTAGGTTACCCGCAATTTTCGGGTATGACGTGGAGAACAATTTATGGCCAAAGTTTGTGTATCTTGTCAAGGAAATGGAGAGGGATTTGGAGGACTTGAAGAGGTTCCCTCAGTACTTTGGGTTCAGTTTGAAGGAGAGGATTGTGCCAAGGCACTTGCATTTGAAAAAAAGGGGTGTTAGGATTCCCTTGAATAGAATGTTGATGTGGGCTGATCCAAAGTTCTACGCCAAGTGGAAGTGA 813 0.5351 MLLSYSLHLPITSSYSHTSNRSPNSSGYIKFRTRYRENLRYLRALTIIDPKTKPEDLPLPNDVDHIIDTLTFLKSHSFSDADIPRLKFLTPELFTTAVVPSDVSAVFRFLADDLAATKSESRDLILRCPKLLFSHVDLCLRPTLQFLRQGLNRPTTRNAHLLNTRVDKLHAKVEFLQELGFSYEEAVRACARLPAIFGYDVENNLWPKFVYLVKEMERDLEDLKRFPQYFGFSLKERIVPRHLHLKKRGVRIPLNRMLMWADPKFYAKWK* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1822 270 Gene3D Transcription termination factor 3, mitochondrial 57 270 IPR038538 -
Gso18g1822 270 PANTHER CGI-12 PROTEIN-RELATED 14 270 IPR003690 GO:0003690|GO:0006355
Gso18g1822 270 SMART mt_12 187 219 IPR003690 GO:0003690|GO:0006355
Gso18g1822 270 SMART mt_12 220 251 IPR003690 GO:0003690|GO:0006355
Gso18g1822 270 SMART mt_12 156 182 IPR003690 GO:0003690|GO:0006355
Gso18g1822 270 SMART mt_12 122 154 IPR003690 GO:0003690|GO:0006355
Gso18g1822 270 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 14 270 - -
Gso18g1822 270 Pfam mTERF 159 265 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso18g1822 mTERF 5.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1822 K15032 - gmx:100812333 540.421