Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1818 ATGCATTGCATAGCTAATTCCGAAAGGGCACTTGTGTTGGAAAGAATGGACAGCTCCATTTTTCGCCTTATAGTTTCGTCGTGTCTTCTTTTTACTTTCCTGCTGGAAGCTGTTCATGGCAGCAAAAAGTGTTACATTGTATACTTGGGAGCTCATTCTCATGGTCCTAGCCCTACCTCTCTTGACCTCGAAATCGCTTCCCATTCTCATTATGATTTACTAGCTTCAGTCTTGGGAAGTGAGGAGAAAGCGAAAGAAGCAATTATTTACTCATATAATAAACACATCAATGGCTTGGCTGCGCTACTTGAGGAGGAAGAAGCAGCAGATATTGCAAAAAACCCAAATGTGGTGTCTGTGTTCTTGAGCAAAGAACATAAACTGCTCACAACTCGGTCTTGGGAATTTCTTGGACTAGACAGTAATAGTAAGGACTCTGCATGGCAAAAGGGGAGATTTGGTGAAAATACAATAATTGGTAACATCGACACAGGTGTTTGGCCTGAATCCGAGAGCTTCAGTGATAATGGATTTGGCTCCGTCCCATCAAAATGGCGAGGGGGTAACGTTTGTCAAATTAACAAACTCCCTGGCTCCAACAGAAATCCATGCAACAGGAAGCTGATTGGAGCAAGATTCTTTAACAAAGCTTTCGAGGCAGCCAATGGGCAACTTGATCCATCTAACGAAACAGCACGTGATTTTGTGGGGCATGGAACCCATACTCTATCAACCGCAGGGGGAAATTTTGTCCCAGGAGCGAGTGTATTTGCCGTTGGCAATGGCACTGCAAAGGGTGGGTCACCAAGAGCTAGGGTTGCAGCTTACAAAGTGTGTTGGTCTCTTACTGATTCTGGAAATTGTTACGGGGCTGATGTGTTAGCTGCTATTGACCAAGCCATAGATGATGGCGTTGATATCATCAATCTTTCTGCTGGTGGAGGCTACGTTGTGACTCCAGAAGGAGGAAAATTTACAGATGAGGTTTCCATTGGGGCATTACATGCAATTGCTAGAAACATACTTTTAGTTGCCTCTGCAGGGAATGATGGACCCACACCTGGAACTGTTCTCAATGTGGCTCCTTGGGTCTTCACAATTGCTGCTAGCACATTAGACAGAGACTTTAGCAGTAATTTAACCATCAACAATAGGCAGCAAATTACGGGAGCCAGTCTTTTCGTAACTTTGCCACCCAATCAAACCTTTTCTCTGATCCTTGCGACTGATGCTAAGCTTGCTAATGCGACATGTGGAGATGCTGCATTTTGCAAGCCTGGAACACTTGATCCTGAAAAAGTAAAAGGGAAAATAGTGCGTTGTAGTAGAGATGGAAAAATAACATCCGTTGCCGAGGGTCAGGAAGCTCTATCTAATGGCGCCGTGGCAATGCTTTTGGGCAATCAAAATCAAAATGGGAGAACCCTTCTTGCAGAGCCTCATGTTTTGTCTACTGTGACCGACAGTGAAGGCATTCAAATCACAACGCCACCCAGATCGCAGAACCCTACTGGGGACGAGGACGACATCCCTATAGAAACGGGTGCTACAATAAGAATGTCCCCAGCAAGAACATTATTTGGAATAAAGCCAGCTCCAGTTATGGCTTCATTTTCATCTAGAGGACCCAATAAGATTCAACCATCAATACTCAAGCCCGATGTGACTGCGCCTGGTGTGAACATACTTGCTGCCTATTCAGAATTGGCAAGTGCATCGAACTTGCTAGTAGACAATCGTCGAGGGTTTAAATTCAATGTATTACAAGGAACTTCTGTGTCTTGTCCTCATGTCGCTGGTATTGCTGGACTTATCAAAACACTTCATCCTAATTGGAGTCCTGCAGCTATTAAATCAGCGATCATGACCACAGCAACCACACTTGACAACACAAATAGGCCAATACAGGATGCGTTTGATGATAAACTGGCAGATGCCTTTGCATATGGTTCAGGACATGTGCAACCGGAACTTGCGATAGATCCGGGACTTGTTTATGATCTATGCCTCGATGATTACTTGAACTTTTTGTGTGCTTCCGGATACGACCAACAACTCATCTCCGCACTCAATTTCAATGTCACATTCATTTGTAAAGGGTGTGACAGCGTAACAGACTTGAACTACCCTTCAATCACATTACCAAATCTTGGCCTAAAACCCTTAACCATTACTCGCACAGTCACAAATGTTGGACCACCAGCCACATACACTGCAAATGTCAACTCGCCTGCTGGATATACCATTGTCGTTGTGCCAAGATCCTTGACCTTCACGAAAATTGGTGAAAAGAAGAAATTCCAAGTTATTGTGCAGGCAAGCAGTGTAACTACGCGGGGAAAGTATGAATTCGGGGATTTGCGTTGGACAGATGGAAAGCATATAGTAAGGAGTCCTATTACAGTTAAGCGCAGATGA 2418 0.4425 MHCIANSERALVLERMDSSIFRLIVSSCLLFTFLLEAVHGSKKCYIVYLGAHSHGPSPTSLDLEIASHSHYDLLASVLGSEEKAKEAIIYSYNKHINGLAALLEEEEAADIAKNPNVVSVFLSKEHKLLTTRSWEFLGLDSNSKDSAWQKGRFGENTIIGNIDTGVWPESESFSDNGFGSVPSKWRGGNVCQINKLPGSNRNPCNRKLIGARFFNKAFEAANGQLDPSNETARDFVGHGTHTLSTAGGNFVPGASVFAVGNGTAKGGSPRARVAAYKVCWSLTDSGNCYGADVLAAIDQAIDDGVDIINLSAGGGYVVTPEGGKFTDEVSIGALHAIARNILLVASAGNDGPTPGTVLNVAPWVFTIAASTLDRDFSSNLTINNRQQITGASLFVTLPPNQTFSLILATDAKLANATCGDAAFCKPGTLDPEKVKGKIVRCSRDGKITSVAEGQEALSNGAVAMLLGNQNQNGRTLLAEPHVLSTVTDSEGIQITTPPRSQNPTGDEDDIPIETGATIRMSPARTLFGIKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSELASASNLLVDNRRGFKFNVLQGTSVSCPHVAGIAGLIKTLHPNWSPAAIKSAIMTTATTLDNTNRPIQDAFDDKLADAFAYGSGHVQPELAIDPGLVYDLCLDDYLNFLCASGYDQQLISALNFNVTFICKGCDSVTDLNYPSITLPNLGLKPLTITRTVTNVGPPATYTANVNSPAGYTIVVVPRSLTFTKIGEKKKFQVIVQASSVTTRGKYEFGDLRWTDGKHIVRSPITVKRR* 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1818 805 Gene3D - 373 527 - -
Gso18g1818 805 Pfam Fibronectin type-III domain 706 802 IPR041469 -
Gso18g1818 805 MobiDBLite consensus disorder prediction 488 503 - -
Gso18g1818 805 Pfam Peptidase inhibitor I9 45 127 IPR010259 -
Gso18g1818 805 SUPERFAMILY Subtilisin-like 128 664 IPR036852 GO:0004252|GO:0006508
Gso18g1818 805 CDD Peptidases_S8_3 126 626 IPR034197 -
Gso18g1818 805 ProSiteProfiles Serine proteases, subtilase domain profile. 133 660 - -
Gso18g1818 805 MobiDBLite consensus disorder prediction 488 508 - -
Gso18g1818 805 Pfam Subtilase family 154 631 IPR000209 GO:0006508|GO:0008236
Gso18g1818 805 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 34 128 IPR037045 -
Gso18g1818 805 PANTHER SUBTILISIN-LIKE PROTEASE GLYMA18G48580 29 803 - -
Gso18g1818 805 Gene3D Peptidase S8/S53 domain 157 673 IPR036852 GO:0004252|GO:0006508
Gso18g1818 805 Gene3D - 677 804 - -
Gso18g1818 805 PRINTS Subtilisin serine protease family (S8) signature 154 173 IPR015500 -
Gso18g1818 805 PRINTS Subtilisin serine protease family (S8) signature 234 247 IPR015500 -
Gso18g1818 805 PRINTS Subtilisin serine protease family (S8) signature 589 605 IPR015500 -
Gso18g1818 805 CDD PA_subtilisin_like 379 505 - -
Gso18g1818 805 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 803 IPR045051 -
Gso18g1818 805 ProSitePatterns Serine proteases, subtilase family, serine active site. 590 600 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1818 Gso-Chr18 50739029 50749123 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1818 45 803 Subtilisin-like Serine Gene Family AT2G04160 51.832 0.0 746
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1818 - - gmx:100811937 1593.17