Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1806 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTAGTTGAGGTATCTAATGGACACACCGCTGCAATAAGAGAAGCTGGTCAAAGACTAAATGGGCAGGATGTTTCGAGTGTGTGTGGGATTCCAGCAAGAGAAGGGAATCAGTTTTCAAAATCACGGGATGGCCCTATGGCACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCGAATGCACGAATAGTTTTGGTAAGAGAGGATATGGGATTCGATACACGCTGTCAAGAGCCTCCCTCCCCTGTGCCTGTGCCTACAAGAACATGGAAAGGAAAGGGCTCTTTACCAGAAGCTGTAGAACTTGTGTCTGATATTGAGAAATTGAAGGGTAGCAATGATTCTTTTGTGGAAACTGGTCCAAGTTCATTTGCTGGTGCTAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACAGTTTTTGTACCAATAGGTCAAACTAAATCTGAAGCTGGATGCTTAATGAAGAGCGTGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCGTGTTCTTGCAAAGAAACCAAGCCTGGCTGTTGTTTCTCCTGCAGAAATCATGGCTGAGGAATCAAATGAGATGGGTAACTTATCCTCACCATTTTCAGGTGCTCGTGCATCACAGAATACTGAGAACTCTCCCCTTGCCCCAGACTCTGATGAGAAAGAATGTGTTTGGGATGCATCATTGCCTCCAAGTGGCAATGTCAGTCCTCATAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATTGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTTACTAGTGATGGAATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGACAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGCAGTGCCAATAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGAGCCCGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGGCTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCACAGACAGAAAGAGAGATATTGCAGTTGCTGGATCATCCATTTCTACCTACTTTGTATACACATTTTGAGACTGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCTGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTTGTGTATCGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGATTTCGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTATTAGAAATTTTGACAGCGACCCCTCAAAACGAGGTGGTGGTGCATTCTGTGTCCAGCCGGCATGTATCGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTTATGCCTCGCCTCTTTGCTCAGAAAAATAAGAAGTCACGAAAGCCTAAAGGCGATCCTGGCTTGCCATCCAGCACGCTTCCTGAGCTTGTTGCAGAACCAACAACAGCTCGGTCGATGTCTTTTGTTGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCAACACTGTTCAATGTAGTGGGCCAGCAGCTCAGATTTCCTGAATCGCCGGCCACGAGTTATGCCAGCCGTGATCTGATCCGGGGCTTGCTGGTGAAGGAGCCGCAGCACCGTCTCGGGGTGAAGAGAGGCGCGACTGAGATCAAACAACACCCCTTCTTTGAAGGCGTGAACTGGGCATTGATTAGGTGCAGCACACCACCCGAAGTTCCAAGACCAGTTGAATGTGATCCACCGGCAAAGTTTGAACCAGTTGATACTGTTGGGGTTGGCAACAACAACAACAACAATAGTAGTAAGAGGATGGTGGGTAATAATAATGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAA 2301 0.4572 MERVAEPKVLPRSLPVLVEVSNGHTAAIREAGQRLNGQDVSSVCGIPAREGNQFSKSRDGPMARLASIREVAQLSNARIVLVREDMGFDTRCQEPPSPVPVPTRTWKGKGSLPEAVELVSDIEKLKGSNDSFVETGPSSFAGASHPPEPVDTDLMRTVFVPIGQTKSEAGCLMKSVSLKGPFLEDLSIRVLAKKPSLAVVSPAEIMAEESNEMGNLSSPFSGARASQNTENSPLAPDSDEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNFDSDPSKRGGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRKPKGDPGLPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVECDPPAKFEPVDTVGVGNNNNNNSSKRMVGNNNDMKSGGKYLDFEFF* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1806 766 ProSiteProfiles Protein kinase domain profile. 367 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1806 766 SUPERFAMILY Protein kinase-like (PK-like) 349 722 IPR011009 -
Gso18g1806 766 MobiDBLite consensus disorder prediction 212 263 - -
Gso18g1806 766 MobiDBLite consensus disorder prediction 296 344 - -
Gso18g1806 766 Gene3D Transferase(Phosphotransferase) domain 1 451 717 - -
Gso18g1806 766 MobiDBLite consensus disorder prediction 296 340 - -
Gso18g1806 766 MobiDBLite consensus disorder prediction 212 234 - -
Gso18g1806 766 PANTHER FLIPPASE KINASE 1-RELATED 76 766 - -
Gso18g1806 766 Pfam Protein kinase domain 368 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1806 766 Pfam Protein kinase domain 596 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1806 766 Gene3D Phosphorylase Kinase; domain 1 367 450 - -
Gso18g1806 766 MobiDBLite consensus disorder prediction 730 751 - -
Gso18g1806 766 MobiDBLite consensus disorder prediction 568 587 - -
Gso18g1806 766 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 76 766 - -
Gso18g1806 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Gso18g1806 766 MobiDBLite consensus disorder prediction 733 751 - -
Gso18g1806 766 SMART serkin_6 367 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1806 766 CDD STKc_phototropin_like 365 718 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1806 Gso-Chr18 50548285 50553423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1806 1 766 AGC Kinase Gene Family AT2G44830 65.793 0.0 949
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso18g1806 Pkinase 8.6e-37 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1806 18 50548285 50553423 Gso9g1994 9 44385523 44390564 GST
Gso7g0971 7 12047691 12052172 Gso18g1806 18 50548285 50553423 PCT
Gso3g0952 3 33488985 33493522 Gso18g1806 18 50548285 50553423 PCT