Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1786 ATGGCTGCTTGTGCTTTGTTCAGTGCTGGCGGTAACATTACCGAAGATGGCAATGTTAATGGAAGTGGAAGTGCTTCTAGTACTCCTTTGACAAGTGCCTCTAACTCTAGCAGCATGAGCAACGAAGAAAAAAAACACAACCTACATGGTGGTGGCATCATGCCACAGCCTCATTGTGAAAGAAAAATGGTGAGAAAAAGAATGGCTTCTGAGATGGAAGTTAACGTTCACGCAACTCCACCACACAACTCTTCCTCCACAACAAGTGATTATATTAGGTTTCCTCGTCGAAGCAGCACCAACATGAACATGTTAGAAAAAGGGTCCACCAGTACCACCACAGCAACAACAACAACATTAGCCGAAGGTACATGTAATAATAATAATAATAATAATAATAGTAATTGTAGTAGCTATCATTATAATAATAGTAACAATAGTAATAGTGGTAATATTTCATCAAGAGATAACGTTGCTATTCCAAATTACCCCACTGTGACGGTCACAACCAACTACTCCACTATGTTGCTACCTTCATCCACCACCACCACTATCAATTCCTCTGGTGTTGCTCCAAACTACATCACTCACCACCAACACCATCATTTCCAAGGACTCGTTGAAAGCCAGGACCATCAGCAAAACCCTGTGCCTGCAGTTTGTGGATTCTCAGGGTTACCACTTTTTCCATCTCAAAGCCAAAGAAACCGAGACAGCAACAACACCCCCACCACCAACAACATAAGAAACAGTGGTGGAAATATTGTTGACGTGGTTGCTTCTTCTTCTTCTTCTTCTTCCATGGATGACACTTCAGCAGCAGCAGCAACAAGTGGTTGGATCGATGGTATATTGAAGGATCTCATTCACAGTTCCAACAGTGTTTCGATTCCTCAACTAATCAGCAACGTGAGGGAGATCATATACCCTTGCAACCCCAACCTTGCAATGGTTCTTGAATACAGGTTGCGTCTTCTTCTCACTGAGTCTACAACACAAAACAAAAGAGGCACAGAAGGGGTGCCTCTTCCTCCTTCTGTTTCCTCAGTGAAGCTCACGAGCAACCGTGTTGTCGATGGCATTGTTCCTAATTTGCACTTCACAGATGCTTCAGGTGGTGCTGTGGTTGTGAATCAGCACATGTTGTCCAATTGGGGTGTGCCTCAAATCACTCATCACCATGATAACAACACCAACACCAACACCAACACCAACAATAGCAACAACCCTTCAGTTTCTTTGGTTACTTTGCCTTCACCAACACCGCCGCTACCACCACCTCATTATTCACCACCACAAGAAAAGCACCCTCAAGAAGAGGATCTAGCAGCAACCAGCACGGCTGAGGTGGCACTTTCAAGAAAGAAGAAAGAGGAGCTGCGTGAACAGAAGAAGAAAGACGAAGAGGGTTTGCATCTTCTCACTTTGCTGCTTCAGTGTGCAGAAGCGGTTTCATCTGAGAATCTAGAAGATGCCAACAAGATGCTGCTGGAGATTTCTCAGTTGTCAACACCCTTCGGCACTTCAGCACAGCGTGTGGCAGCATATTTCTCAGAAGCCATATCAGCAAGGTTGGTGAGTTCATGCTTAGGGATATATGCCACTTTGCCACACACTCACCAAAGCCACAAGGTGGCTTCGGCTTTTCAAGTGTTCAATGGTATTAGTCCTTTCGTGAAGTTCTCACACTTCACAGCAAACCAAGCTATTCAAGAAGCTTTCGAGAGGGAAGAGAGGGTGCACATCATAGATCTTGACATAATGCAAGGGTTGCAGTGGCCTGGTTTGTTTCACATTCTAGCTTCAAGACCTGGTGGAGCACCTTATGTGAGGCTCACAGGGCTTGGTACCTCTATGGAAGCACTTGAAGCCACGGGAAAACGCTTGTCTGATTTTGCAAACAAACTTGGCCTTCCCTTTGAGTTCTTCCCTGTGGCTGAGAAAGTTGGGAACCTTGACCCTGAGAGGCTCAATGTTTGCAAAACCGAAGCTGTTGCTGTTCACTGGTTGCAACATTCCCTCTATGATGTCACTGGCTCAGACACCAACACCTTGTGGCTCTTGCAGAGGCTGGCACCTAAAGTGGTGACTGTGGTGGAGCAGGACCTAAGCAACACTGGTTCATTCTTGGGGAGGTTTGTGGAAGCCATACACTACTACTCAGCATTATTTGACTCTCTTGGGTCAAGCTATGGGGAGGAGAGTGAGGAGAGGCATGTGGTGGAACAGCAACTATTGTCTAGGGAGATTCGAAATGTGCTAGCTGTTGGGGGGCCATCAAGGACTGGAGAGCCAAAGTTTCATAACTGGAGGGAAAAGCTTCAACAGTGTGGGTTTAGAGGCATATCTCTAGCTGGTAATGCTGCCACACAAGCTAGTCTACTCCTTGGTATGTTCCCATCTGAGGGCTATACCTTGGTGGAGGACAATGGCATTCTTAAACTTGGTTGGAAGGACCTTTGCTTGCTCACTGCTTCAGCTTGGAGACCACCCTTCCATAGTGCCATTACCCATCACAACTAG 2523 0.4594 MAACALFSAGGNITEDGNVNGSGSASSTPLTSASNSSSMSNEEKKHNLHGGGIMPQPHCERKMVRKRMASEMEVNVHATPPHNSSSTTSDYIRFPRRSSTNMNMLEKGSTSTTTATTTTLAEGTCNNNNNNNNSNCSSYHYNNSNNSNSGNISSRDNVAIPNYPTVTVTTNYSTMLLPSSTTTTINSSGVAPNYITHHQHHHFQGLVESQDHQQNPVPAVCGFSGLPLFPSQSQRNRDSNNTPTTNNIRNSGGNIVDVVASSSSSSSMDDTSAAAATSGWIDGILKDLIHSSNSVSIPQLISNVREIIYPCNPNLAMVLEYRLRLLLTESTTQNKRGTEGVPLPPSVSSVKLTSNRVVDGIVPNLHFTDASGGAVVVNQHMLSNWGVPQITHHHDNNTNTNTNTNNSNNPSVSLVTLPSPTPPLPPPHYSPPQEKHPQEEDLAATSTAEVALSRKKKEELREQKKKDEEGLHLLTLLLQCAEAVSSENLEDANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPHTHQSHKVASAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGAPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVAEKVGNLDPERLNVCKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSNTGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGEPKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPSEGYTLVEDNGILKLGWKDLCLLTASAWRPPFHSAITHHN* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1786 840 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 174 831 IPR005202 -
Gso18g1786 840 MobiDBLite consensus disorder prediction 230 254 - -
Gso18g1786 840 MobiDBLite consensus disorder prediction 416 432 - -
Gso18g1786 840 ProSiteProfiles GRAS family profile. 464 829 IPR005202 -
Gso18g1786 840 MobiDBLite consensus disorder prediction 388 415 - -
Gso18g1786 840 MobiDBLite consensus disorder prediction 451 465 - -
Gso18g1786 840 MobiDBLite consensus disorder prediction 388 465 - -
Gso18g1786 840 Pfam GRAS domain family 474 829 IPR005202 -
Gso18g1786 840 MobiDBLite consensus disorder prediction 12 58 - -
Gso18g1786 840 MobiDBLite consensus disorder prediction 13 41 - -
Gso18g1786 840 PANTHER PROTEIN SCARECROW 174 831 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1786 Gso-Chr18 50325408 50329613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1786 437 830 GRAS Transcription Factor Family AT3G54220 82.222 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso18g1786 GRAS 1.7e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1786 - - gmx:100806779 1477.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1786 18 50325408 50329613 Gso9g2227 9 46581237 46585224 GST