Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1782 ATGCATTCGAATTCCTTCAAGCTCATCTTCCTTTGTACCCTTGTTATTTTGTTCAATTTCCCAACTACTAAAGCACAGGAGTCCCACGATTATCTTAACCAAATGTGCAGTGAAAGCGAAATCCCTGCCAACAGCACCTATGAAAAGAACCTGAGGACTCTCTTCTCTTCCTTATCTTCGAAGGCAACCGCCAAAACATTCTTCTACGACACAGTGGTGGGCAGAAACTCCTTTGACACGGTGTATGGTATGTTCATGTGCAGGGGTGATGTACCCTCTCAACTCTGTGGGCAGTGTGTGGTAAATGCAACCCACACCCGAGATTCAGAGCCAGGTTGTTCCAGGTCCATATGGGATGTGATTTGGTACGAGGAGTGCATGGTTCGGTATTCCAACGTCCCTTTCTACTCCAAAGTGGCCACACATCCCTTCTGTTACAAGTGGAGCTTGGCCAATATCTCCTACAACCCAGAAAGTTTCATGAGTTTGTTGTACAACACCATGAACCATACTGCACATGAAGCAGCCATTTCTGGTAACATGTACTCCACAAAGCAAGCAAACTATTCTAATTCTGAGACCCTATACTGTCTGGCTCAGTGCACACAAGACCTCTCACCCCAAAACTGCACAGCCTGTCTTACTCAAGCAATAGAGTACCTCCCCAACTGCTGTGAAGGAAAGCAAGGAGGTAGAGTTTTGTTTCCCAGTTGTAACATTAGGTATGAATTGTACCCTTTCTTCCGCAATGTCACGGATGAGGCACTACCAGAAGGAATTGTTCCTGAGACAAAATATTCACACACGGATTCAGAATATTCAGAAGATCCTGGCTATATTTCTCACAACTGCTCAACCGACCAAATCATTAACGATACTGCTTTCGAATCAAACCTCAAGACCCTCTTCTCTGATTTGACTTCCAACGCCACCAGTGGCAACAGAAACAGCAAAAGAGCGGGAGCGGGAACACTGCAAGGCTTCTTCACGTGTCGTGTCGACCTTTCTCGTACCCTTTGTGGAGAATGCGTCCAAAACGCAACGGAGAAAATATTCTCCGCGTGTGGTTTGGCTGCGGAGGGTGTGATTTGGTACAATCACTGCTGGCTTCGCTATTCAAATCGATCCTTTGCCATGGAAACAAGTCCCAGCTATGTGGATCTGAATGTCACCGACACCTATAATCAGGTGCAATATTCCTCTCATGCTTTGACATTGATATCCAATAAATTAGCTGCAATGGCGGATGGCACGGGCCAAATTCTTGACAAATATCAAAGTGGAACATTGATATTGAATAATAAACAAAGGGTGTATATTCTTGCTCAGTGTGCATTGGATCTATCTAGTGAAGATTGTGGTGCCTGCCTAAGTGATATGGTTGGATCAGCAATTCCATGGACTCGTTTGGGAACCCTAGGTGGCAGAGTTCTGTATCCTACCTGTATTCTCCGCTTTGAACTGTTCCAGTTTTACGATCTGATTCCCACCACAGCAATCACTCATCCACTTCTACTAGCACCAGCATCAGGAAAAGGTCGATCACGAACTATTATCTTGATCCTTACCTCCGCCATCATTGTTTTGGGGGTACTTTTCACCTTTTGCTACTATTTGATTCGAAGAAAAGCAAGGAATAATAAAACTATTCTCAGAGAAAACTTTGGACATGAAAGTTCCACCATAGAGTCATTGCAATTCAATTTGCCAACAATTGTAGCAGCTACAAACAACTTTTCATATGAGAACAAGATTGGCAAAGGAGGATTTGGGGAAGTTTATAAGGGCATTCTTAGTGATGAAAGACCAATAGCAGTAAAGAGGCTCTCAAGAACTTCAAAGCAAGGTGTAGAGGAGTTTAAAAATGAGGTTTTGTTGATAGCCAAACTTCAACACAGAAATTTAGTGACATTTATTGGATTTTGTCTTGAAGAGCAAGAGAAAATACTTATATATGAATACGTGCCAAACAAGAGTCTGGACTACTTCTTATTTGATACTAAACTAGAAAAGATTTTGACTTGGTCTGAGCGTCACAAAATCATAGAAGGAATTGCTCGAGGAATTCTATATTTACACGAATATTCTCGACTTAAAATTATACATCGTGATCTTAAACCTAGTAATGTACTATTAGACAAAAATATGAATCCAAAGATTTCAGATTTTGGACTTGCTAAAATTGTTGAACTAGATCAACAAGAAGGAAGTACAAATAGAATTATTGGAACATACGGCTTTATGGCTCCAGAGTATGCTATGTTTGGACAATTTTCTGAGAAATCGGATGTATACAGTTTTGGAGTTATGGTTCTCGAGATTATTAGTGGGAAAAAGAATATAAGTTCATATGAACCACGTCGTGTTGTTGATGATGGCCTTTTAAAATTTTTCTGGAGACATTGGAGGGATGAAACACCATTCAACACATTAGACGAAAAATTAAAGGAAAGTTATTCTGAAATTGAAGTCATCAAATGCATTCAAATTGGTTTATTATGTGTTCAAGAAGATCCAAATGCTAGACCAACAATGATGTCAATTGTCTCATATCTCAATAATCACTCGATTGAGTTGCCAACTCCACATGAACCAACCTTTTTCTTATACAATAGAATGGATCCAATTGCCTATGAATCAAATTCAGGGCAATCTTCCAACAGTTTCATATCATCCTCTATCAATGAAATGTCTATAAGTACATTCTACCCTAGATTGGCTATAGCAGAAAACAAAGGTGGATGGAGTGCTCTTAGTAACCACTCTTTGGAGTATCTGGTTATCAGGAATGATGAACTCAACATTAAAATAATCATGCATTCGAATTCCTTCAAGCTCATCTTCCTTTTTACCCTTATTATTTTGTTCAATTTCCCAACTACTAAAGCACAGGAGTCCCACGATTATCTTAACCAACTGTGCAGTGACAGCCAAACCCCTGCCAACAGCACCTATGAAAAGAACCTGAGGACTCTCTTATCTTCCTTATCTTCGAAGGCAACCGCCAAAACATTCTTCTACGACACAGTGGTGGGCAGAAACTCCTTTGACACGGTGTATGGTATGTTCATGTGCAGGGGTGATGTACCCTCTCAACTCTGTGGGCAGTGTGTGGTAAATGCAACCCACATCAAATATTCAGAGCCAGATTGTTCCAGGTCCATATGGGATGTGATTTGGTACGAGGAGTGCATGGTTCGGTATTCCAACGTCTCTTTCTTCTCCAAAGTGGCCACACATCCCTTCGGTTACGAGTCGAGCTTGGCCAATATCTCCTCCAACCCAGCAAGTTTCATGAGTTTGTTGTACAACACCATGAACCAAACTGCACATGAAGCAGCCATTTCTGGTAACATGTACTCCACAAAGCAAGCAAACTATTCTAATTCTGAGACCCTATACTGTCTGGCTCAGTGCACACAAGACCTCTCACCCCAAAACTGCACAGCCTGTCTTACTCAAGCAATAGAGTACCTCCCAGACTGCTGTGAAGGAAAGCAAGGAGGTAGAGTTGTGTTTCCCAGTTGTAACATTAGGTTTGAATTGTACCCTTTCTTCCGCAATGTCACGGATGAGGCACTACCAGAAGGAATTGTTCCTGAGACAAAATATTCACACACGGATTCAGAATATTCAGAAGATCCTGGCTATATTTCTCACAACTGCTCAACCGACCAAATCATTAACGATACTGCTTTCGAATCAAACCTCAAGACCCTCTTCTCTGACTTGACTTCCAACGCCACCAGTGGCAACAGAAACAGAAAAAAAGCGGGAACACTGCAAGGCTTCTTCACGTGTCGTGTCGACCTTTCTCGTACCCTTTGTGGAGAATGCGTCCAAAACGCAACGGAGAAAATATTCTCCACGTGTGGTTTGGCTGCGGAGGGTGTGATTTGGTACAATCACTGCTGGCTTCGCTATTCAAATCGATCCTTTGCCATGGAAACAAGTCCCAGCTATGTGGATCTGAATGTCACCGACACCGATAATCGGGTGCAATATTCCTCTCATGCTTTGACATTGATATCCAATAAATTAGCTGCAATGGCGGATGGCACGGGCCAAATTCTTGACAAATATCAAAATGGAACATTGATATTGAATAATAAACAAAGGGTTTATATTCTTGCTCAGTGTGCATTGGATCTAACTAGTGATGATTGCAGTGCCTGCCTAAGTGATATGATTGGATCAGCAATTCCATGGACTCGTTTGGGAAGCCTAGGTGGCAGAGTTCTGTATCCTACCTGTATTCTCCGCTTTGAATTGTTCCAGTTTTACGATCTGATTCCCACCACAGCAATTACTCATCCACTTCTACTAGCACCAGCATCAGGAAAAGGTCGATCACGAACTATTATCTTGATCCTTACCTCCGCCATCATTGTTTTGGGGGTACTTTTCACCTTTTGCTACTATTCGATTAGAAGAAAAGCAAGGAATAATAAAACTATTCTCAGAGAAAACTTTGGACATGAAAGTTCCTCCATAGAGTCATTGCAATTCAATTTGCCAACAATTGTAGCAGCTACAAACAACTTTTCATATGAGAACAAGATTGGCAAAGGAGGATTTGGGGAAGTTTATAAGGGCATTCTTAGTGATGGAAGACCAATAGCAGTAAAGAGGCTCTCAAGAACTTCAAAGCAAGGTGTAGAGGAGTTTAAAAATGAGGTTTTGTTGATAGCCAAACTTCAACACAGAAATTTAGTGACATTTATTGGATTTTGTCTTGAAGAGCAAGAGAAAATACTTATATATGAATTCGTGCCAAACAAGAGTCTCGACTACTTCTTATTTGATACTAAACTAGAAAAGGTTTTGACTTGGTCTGAGCGTTACAAAATCATAGAAGGAATTGCTCGAGGAATTCTATATTTACACGAATATTCTCGACTTAAAATTATACATCGTGATCTTAAACCTAGTAATGTACTATTAGACAAAAATATGAATCCAAAGATTTCAGATTTTGGACTAGCTAAAATTGTTGAACTAGATCAACAAGAAGGAAGTACAAATAGAATTATTGGAACATACGGCTTTATGGCTCCAGAGTATGCTATGTTTGGACAATTTTCTGAGAAATCGGATGTATACAGTTTTGGAGTTATGGTTCTCGAGATTATTAGTGGGAAAAAGAATATAAGTTCATATGAACCACGTCGTGTTGTTGATGATGGCCTTTTAAAATTTTTCTGGAGACATTGGAGGGATGAAACACCATTCAACACATTAGACGAAAAATTAAAGGAAAGTTATTCTGAAATTGAAGTCATCAAATGCATTCAAATTGGTTTATTATGTGTTCAAGAAGATCCAAATGCTAGACCAACAATGATGTCAATTGTCTCATATCTCAATAATCACTCGATTGAGTTGCCAACTCCACATGAACCAACCTTTTTCTTATACAATAGAATGGATCCAATTGCCTATGAATCAAATTCAGGGCAATCTTCCAACAGTTTCATATCATCCTCTATCAATGAAATGTCTATAAGTACATTCTACCCTAGATAA 5526 0.403 MHSNSFKLIFLCTLVILFNFPTTKAQESHDYLNQMCSESEIPANSTYEKNLRTLFSSLSSKATAKTFFYDTVVGRNSFDTVYGMFMCRGDVPSQLCGQCVVNATHTRDSEPGCSRSIWDVIWYEECMVRYSNVPFYSKVATHPFCYKWSLANISYNPESFMSLLYNTMNHTAHEAAISGNMYSTKQANYSNSETLYCLAQCTQDLSPQNCTACLTQAIEYLPNCCEGKQGGRVLFPSCNIRYELYPFFRNVTDEALPEGIVPETKYSHTDSEYSEDPGYISHNCSTDQIINDTAFESNLKTLFSDLTSNATSGNRNSKRAGAGTLQGFFTCRVDLSRTLCGECVQNATEKIFSACGLAAEGVIWYNHCWLRYSNRSFAMETSPSYVDLNVTDTYNQVQYSSHALTLISNKLAAMADGTGQILDKYQSGTLILNNKQRVYILAQCALDLSSEDCGACLSDMVGSAIPWTRLGTLGGRVLYPTCILRFELFQFYDLIPTTAITHPLLLAPASGKGRSRTIILILTSAIIVLGVLFTFCYYLIRRKARNNKTILRENFGHESSTIESLQFNLPTIVAATNNFSYENKIGKGGFGEVYKGILSDERPIAVKRLSRTSKQGVEEFKNEVLLIAKLQHRNLVTFIGFCLEEQEKILIYEYVPNKSLDYFLFDTKLEKILTWSERHKIIEGIARGILYLHEYSRLKIIHRDLKPSNVLLDKNMNPKISDFGLAKIVELDQQEGSTNRIIGTYGFMAPEYAMFGQFSEKSDVYSFGVMVLEIISGKKNISSYEPRRVVDDGLLKFFWRHWRDETPFNTLDEKLKESYSEIEVIKCIQIGLLCVQEDPNARPTMMSIVSYLNNHSIELPTPHEPTFFLYNRMDPIAYESNSGQSSNSFISSSINEMSISTFYPRLAIAENKGGWSALSNHSLEYLVIRNDELNIKIIMHSNSFKLIFLFTLIILFNFPTTKAQESHDYLNQLCSDSQTPANSTYEKNLRTLLSSLSSKATAKTFFYDTVVGRNSFDTVYGMFMCRGDVPSQLCGQCVVNATHIKYSEPDCSRSIWDVIWYEECMVRYSNVSFFSKVATHPFGYESSLANISSNPASFMSLLYNTMNQTAHEAAISGNMYSTKQANYSNSETLYCLAQCTQDLSPQNCTACLTQAIEYLPDCCEGKQGGRVVFPSCNIRFELYPFFRNVTDEALPEGIVPETKYSHTDSEYSEDPGYISHNCSTDQIINDTAFESNLKTLFSDLTSNATSGNRNRKKAGTLQGFFTCRVDLSRTLCGECVQNATEKIFSTCGLAAEGVIWYNHCWLRYSNRSFAMETSPSYVDLNVTDTDNRVQYSSHALTLISNKLAAMADGTGQILDKYQNGTLILNNKQRVYILAQCALDLTSDDCSACLSDMIGSAIPWTRLGSLGGRVLYPTCILRFELFQFYDLIPTTAITHPLLLAPASGKGRSRTIILILTSAIIVLGVLFTFCYYSIRRKARNNKTILRENFGHESSSIESLQFNLPTIVAATNNFSYENKIGKGGFGEVYKGILSDGRPIAVKRLSRTSKQGVEEFKNEVLLIAKLQHRNLVTFIGFCLEEQEKILIYEFVPNKSLDYFLFDTKLEKVLTWSERYKIIEGIARGILYLHEYSRLKIIHRDLKPSNVLLDKNMNPKISDFGLAKIVELDQQEGSTNRIIGTYGFMAPEYAMFGQFSEKSDVYSFGVMVLEIISGKKNISSYEPRRVVDDGLLKFFWRHWRDETPFNTLDEKLKESYSEIEVIKCIQIGLLCVQEDPNARPTMMSIVSYLNNHSIELPTPHEPTFFLYNRMDPIAYESNSGQSSNSFISSSINEMSISTFYPR* 1842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1782 1841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Gso18g1782 1841 SUPERFAMILY Protein kinase-like (PK-like) 562 882 IPR011009 -
Gso18g1782 1841 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1208 1429 - -
Gso18g1782 1841 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 269 493 - -
Gso18g1782 1841 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1441 1831 - -
Gso18g1782 1841 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 18 258 - -
Gso18g1782 1841 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 505 895 - -
Gso18g1782 1841 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 956 1196 - -
Gso18g1782 1841 Pfam Salt stress response/antifungal 974 1070 IPR002902 -
Gso18g1782 1841 Pfam Salt stress response/antifungal 284 374 IPR002902 -
Gso18g1782 1841 Pfam Salt stress response/antifungal 157 245 IPR002902 -
Gso18g1782 1841 Pfam Salt stress response/antifungal 36 132 IPR002902 -
Gso18g1782 1841 Pfam Salt stress response/antifungal 397 487 IPR002902 -
Gso18g1782 1841 Pfam Salt stress response/antifungal 1094 1183 IPR002902 -
Gso18g1782 1841 Pfam Salt stress response/antifungal 1222 1310 IPR002902 -
Gso18g1782 1841 Pfam Salt stress response/antifungal 1334 1423 IPR002902 -
Gso18g1782 1841 CDD STKc_IRAK 1521 1790 - -
Gso18g1782 1841 ProSiteProfiles Protein kinase domain profile. 1515 1794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1782 1841 ProSitePatterns Protein kinases ATP-binding region signature. 585 607 IPR017441 GO:0005524
Gso18g1782 1841 SUPERFAMILY Protein kinase-like (PK-like) 1498 1818 IPR011009 -
Gso18g1782 1841 CDD STKc_IRAK 585 854 - -
Gso18g1782 1841 ProSiteProfiles Gnk2-homologous domain profile. 29 135 IPR002902 -
Gso18g1782 1841 Gene3D Transferase(Phosphotransferase) domain 1 1591 1796 - -
Gso18g1782 1841 Gene3D Transferase(Phosphotransferase) domain 1 655 860 - -
Gso18g1782 1841 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1636 1648 IPR008271 GO:0004672|GO:0006468
Gso18g1782 1841 ProSiteProfiles Gnk2-homologous domain profile. 1317 1427 IPR002902 -
Gso18g1782 1841 ProSiteProfiles Protein kinase domain profile. 579 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1782 1841 Pfam Protein tyrosine and serine/threonine kinase 581 852 IPR001245 GO:0004672|GO:0006468
Gso18g1782 1841 Pfam Protein tyrosine and serine/threonine kinase 1517 1788 IPR001245 GO:0004672|GO:0006468
Gso18g1782 1841 ProSiteProfiles Gnk2-homologous domain profile. 277 377 IPR002902 -
Gso18g1782 1841 Gene3D Phosphorylase Kinase; domain 1 1476 1590 - -
Gso18g1782 1841 Gene3D Phosphorylase Kinase; domain 1 541 654 - -
Gso18g1782 1841 SMART serkin_6 1515 1788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1782 1841 SMART serkin_6 579 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1782 1841 ProSiteProfiles Gnk2-homologous domain profile. 381 491 IPR002902 -
Gso18g1782 1841 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1208 1429 - -
Gso18g1782 1841 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 505 895 - -
Gso18g1782 1841 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 956 1196 - -
Gso18g1782 1841 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 269 493 - -
Gso18g1782 1841 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1441 1831 - -
Gso18g1782 1841 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 18 258 - -
Gso18g1782 1841 ProSiteProfiles Gnk2-homologous domain profile. 141 247 IPR002902 -
Gso18g1782 1841 ProSitePatterns Protein kinases ATP-binding region signature. 1521 1543 IPR017441 GO:0005524
Gso18g1782 1841 ProSiteProfiles Gnk2-homologous domain profile. 967 1073 IPR002902 -
Gso18g1782 1841 ProSiteProfiles Gnk2-homologous domain profile. 1215 1313 IPR002902 -
Gso18g1782 1841 ProSiteProfiles Gnk2-homologous domain profile. 1079 1185 IPR002902 -
Gso18g1782 1841 Gene3D - 966 1073 IPR038408 -
Gso18g1782 1841 Gene3D - 143 247 IPR038408 -
Gso18g1782 1841 Gene3D - 1215 1313 IPR038408 -
Gso18g1782 1841 Gene3D - 1320 1427 IPR038408 -
Gso18g1782 1841 Gene3D - 277 377 IPR038408 -
Gso18g1782 1841 Gene3D - 1084 1185 IPR038408 -
Gso18g1782 1841 Gene3D - 28 135 IPR038408 -
Gso18g1782 1841 Gene3D - 384 491 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1782 Gso-Chr18 50261412 50273624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1782 274 905 Receptor kinase-like Gene Family AT4G05200 41.717 9.49e-158 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso18g1782 PK_Tyr_Ser-Thr 9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1782 - - gsj:114397382 3659.38