Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1780 ATGGCTTCCAATTCCTTCATGCTCGTCTTCCTTTGCGTCCTTGTTACCTTGTTCAACTTTGCAACCACTACTAAAGCACAGAACGTGGACCAGGTTTATTTTGTTTCCCAAAGTTGCAGTGCAAACAAAACCACTGCCAACAGCGCCTACGAAAAGAACCTTAAGACCCTTCTCTCTTCCTTATCTTCCAACGCCACTGCAACCTTATTCTACAACAACACAGTCCTCGGCAGCACAAACACTACCTCTGACACAGTGTACGGTCTATTCATGTGCAGGGGTGATATACCCCTTCGCCTCTGCAAAGAATGCGTGGCGAACGCAACCGAGAAACTATCTTCAGACCAAAGCTGTTCTCTTTCGAAACAGGCTGTGATGTGGTACGCTGAATGCATAGTTCGGTATTCCAACGTCGGCTTCTTCTCCACCGTGGCCACATCTCCCGGATATTCTTTGTATAACCCGAACGACATCACCGACAACTCAACAAACAGTTTCATGAACTTCTTGTCCAACACCATGAACCAAACTGCAGAAGCCGCAGCCAATTCTGCTAAAAGGTTCTCAACAAAGGAAGCAAACTTGTCTCAGTCTCAGACCCTTTACTGTCTGGCTCAGTGCACAGAAGACTTGTCACCCCAAAACTGCACAACCTGTCTTGCGCAAGCAATACGTGAGCTTCCAATATGTTGTTATGCAAAACAAGGAGGAAGAGTAGGGTTTCCCAGTTGCAACGTTTGGTATGAACTGTACCCTTTCTACGGCCTCATCACGGATCAGACTCCAAGTCCAACCAGTACTCCTCTTCCTCCTCCTCCATCATCATCATCATCAGGGAAAGGTCAACCACGGAATATTATTTTGATCCTTACCTCCAGCATTACTCTACCAGGGATACTTTTCACCTTTTACTATTATTTCATACGCAGAAAAGCAAAAAAGAATAACAAAACTATTCTTAGGAAAAATTTTGGGCATGAAACTTCCACCATAGAGTCATTGCAATTCAACTTAGCAATAATTGAAATAGCAACAAACAACTTTTCACACGAGAACAAGATTGGTAAAGGTGGATTTGGAGAAGTTTATAAGGGCATTCTTATTGACGGAAGACCTATAGCTATAAAGAGACTCTCAAGAAATTCTAAGCAAGGTGTAGAAGAGTTCAAAAATGAAGTTCTATTAATAGCCAAGCTTCAACATAGAAATCTAGTGACATTCATAGGATTTTCTCTTGACGAACAAGAGAAAATACTAATCTATGAATACGTGCCAAACAAGAGTCTAGACTTCTTCTTATTTGATACTAAATTGGGAAATGTTTTGAGCTGGTCTAAGCGTTACAAAATCATAAGAGGAATTGCTCAAGGAATTCAATATTTACACGAGCATTCTCGACTTAAAGTTATACATCGTGATCTTAAACCCAGTAATGTACTGTTAGATGAAAATATGAATCCAAAAATTTCAGATTTTGGTCTTGCTAGAATTGTTGAAATAGATAAAGAGAAAGGTAGTACAAAAAGAATAATTGGAACATATGGCTATATGTCTCCAGAGTATTGTATGTTTGGACATTTTTCTGAGAAATCAGATGTTTACAGTTTTGGAGTTATGGTTCTTGAGATTATTAGTGGGAGAAAAAACATAGATTCATATGAATCACACCAAGTAAATGATGGTCTTCGAAATTTTGTTTGGAGACATTGGATGGATGAAACACCATTGAACATATTGGACCCAAAATTAAAAGAAAATTATTCTAACATTGAAGTCATCAGATGCATTCAAATTGGCTTATTATGTATTCAGGATTACTCGGATGATAGACCTACAATGATGACAATTGCTTCATATCTTAGTAGTCACTCAGTTGAATTGCCTTCCCCACAAGAACCAAAATTTTTCTTGTACCATAGAATAGATCCAATTGCTGCACATGCAAGTTCCAGGCAATTGGCCAATAATTCCCTACCATCCTCTATCAATGAAATATCTATAAGTAAATTCTATCCTCGAACTCCACCCTATATTTTGTTTTCCATTATAACACAAAAGGAAATTCCGGACATGCATAACCATCATGATATGATAATGTTAATGTGGAGCATTAACAGAATAACCATGCCTTGGAAATCCTTCAAGCTTATCTTTCTTTGTATCTTTGTTTGCTTCTTCTTCAATTTTGCAACTACTACTAAAGCACAGGACGCCGACCCTCTTATTATTGGCCAAATTTGCAGCGCAAACAGAACCACTGCCAACAGCGCTTATGAAAAGAACCTCAACACCCTCCTGTCTTCCTTATCTTCCAACGCCAACGCAACCTTATTCTACAACAACACAGTCCTCGGCAGCACAAACTCCTCCGACACCGTGTACGGTCTGTTCATGTGCAGGGGTGATGTACCCTCTCAGCTCTGCGCACGCTGCGTGGTAAACGCAACCGAGAGATTATCTTCAGACCCAGAGTGTTCCCTGTCCATAAAGGGTGTGATTTGGTACGACGAGTGCATGGTTCGGTATTCCAACGTCACTTTCTTCTCCACCGTGGACACAAGACCCTCTTACTATATGTGGAACCTGGCAAATATCTCCTCCAACCCAGAAAACTTCAATAATTTGTTGGCCAGCACCTTTAGGAAAACTGCAGAAGAAGCAGCAAATTCTGGTAATAGGTACTCCACAAAGCAAGCAAACTTATCAGAATTTCAGACCCTTTACTGTCTGGCTCAGTGCACACAAGATCTTTCACCCCAACACTGCAGAGACTGTCTTGATTCAGCAGAGTCCAAAATCCAAATATGCTGCGATGGAAAGCAAGGAGGAAGAGTTTTCTTTCCGAGTTGTAACATTAGGTATCAACTGTACCCTTTCTACCGCAACCTCACGTATGAGGCATCAGAAGCACTGGTTCCTGAAACGAAATATCCAGAAAGAGACTCAGAATATTCAGAAGATCCTGGCTATATTTACCACAACTGCTCAACAAACCAAAACGTGAATGATACTGCTTTCCAATCAGACCGCAAGACCCTCTTCTCTGACTTGTCTTCCAACGCCACCAGTGGCGACAGATACTCGGTAAAAGCCGGAACACTGCGAGGCCTTTTCCGGTGTCGCGGCGACCTTTCTCGTTACCTTTGTGGACAATGCGTCCAAAACGCGACGGAGAAAATCCTCTCCGAGTGTGGTTGGGCTACGGACGTTACAATTTGGTACAATCACTGCTGGCTTCGCTATTCGAATCGGTCCTTCACCATGGAAACAAGTCCTAGCTATCAGAAATGGAATGCCAGCAACACCAATTCGGTGCCATTCTCTGAAGCCTTGACATTCATATCCACTAGATTATCTGTTGTTGCTAGCGAAACAGGGGACACTAGTAACAAATATCAAACCGTACCATTGAAATTGAATGATCGTCAATGGCTGTATATTCTTGCTCAATGCACCTTGGATATATCTAACGAAGATTGCAGCGCGTGCCTAAATGATATGATTGGAGTAATTCCATGGGCTCGTTTGGGAAGCGTAGGTGGACGAATGTTGTATCCTAGCTGTATTCTCCGCTTTGAATTGTTCCAGTTTTACAACCTCTCGCCTACGACACCAACTAATACTTCACCTTCAGGAAATAACTCACGAACTATTATCATTATCCTTATCCCCACCTTCATTGTATTGGGAATACTTTCTACCCTTTGTTTCTATCTGATAACAAGAAAGGCGAGAAAGAATAATAAGATTATTCTCAGAGAAAATTTTGGACAGGAAAGTTCAACTATTGAGTCATTACAATTCAATTTTGCAACAATCGAAGCTGCAACAAACAACTTTTCACACGAGAACAAGATTGGTAGAGGTGGATTTGGAGAAGTTTATAAGGGAATTCTTATTGATGGAAGACCTATAGCTGTAAAGAGACTCTCAAGAAATTCTAAGCAAGGTGTTGAGGAGTTCAAAAATGAAGTTCTATTGATAGCCAAGCTTCAACATAGAAATCTAGTAGCCTTCATAGGATTTTGTCTTGATGAGCAAGAGAAGATACTTATTTATGAATATGTTCCAAACAAAAGTCTTGATTACTTCTTATTTGATACTAAACTAGAAAAGGTTTTGAGTTGGTCTGATCGTCACAAAATCATAGGAGGAATTGCTCGAGGAATTTTATATTTACATGAACATTCTAGACTTAAAGTTATACATCGTGATCTTAAACCTAGCAATGTATTGTTGGACGAAAATATGAATCCAAAAATTTCAGATTTTGGTCTTGCTAGAATTGTTGAAATAGATCAACAGGAAGGAAGTACAAATAGAATTATTGGAACATATGGCTATATGTCTCCAGAGTATGCTATGTTTGGACAATTTTCAGACAAATCAGATGTTTATAGCTTTGGAGTTATGATTCTCGAGATTATTAGTGGAAAAAAGAATATAGGCTCCTACGAACCACATCGTGTTGCTGATGGTCTTCTAAATTTTGTTTGGAGACATTGGAAGGATGAAACACCATTGAACACATTGGACCCCAAATTAAGAGATAATTATTCTAACATTGAAGTCATCAAATGCATTCGAATTGGTTTATTATGTGTTCAAGAAAATCCGGATGCTAGACCTACAATGTTGACAATTGTCTCATATCTCAGTAGTCACTCAATAGAGTTGCCATCTCCACAAGAGCCAACATTTTTCTTATACCATAGAATGGATCCAACTGTTGCACATGAATCAAGTTCGAGGCAATCTACCAATAATTCCATACCATCATCTATAAATGAAATGTCTATAAGTAAATTTTATCCTCGATAG 4821 0.3974 MASNSFMLVFLCVLVTLFNFATTTKAQNVDQVYFVSQSCSANKTTANSAYEKNLKTLLSSLSSNATATLFYNNTVLGSTNTTSDTVYGLFMCRGDIPLRLCKECVANATEKLSSDQSCSLSKQAVMWYAECIVRYSNVGFFSTVATSPGYSLYNPNDITDNSTNSFMNFLSNTMNQTAEAAANSAKRFSTKEANLSQSQTLYCLAQCTEDLSPQNCTTCLAQAIRELPICCYAKQGGRVGFPSCNVWYELYPFYGLITDQTPSPTSTPLPPPPSSSSSGKGQPRNIILILTSSITLPGILFTFYYYFIRRKAKKNNKTILRKNFGHETSTIESLQFNLAIIEIATNNFSHENKIGKGGFGEVYKGILIDGRPIAIKRLSRNSKQGVEEFKNEVLLIAKLQHRNLVTFIGFSLDEQEKILIYEYVPNKSLDFFLFDTKLGNVLSWSKRYKIIRGIAQGIQYLHEHSRLKVIHRDLKPSNVLLDENMNPKISDFGLARIVEIDKEKGSTKRIIGTYGYMSPEYCMFGHFSEKSDVYSFGVMVLEIISGRKNIDSYESHQVNDGLRNFVWRHWMDETPLNILDPKLKENYSNIEVIRCIQIGLLCIQDYSDDRPTMMTIASYLSSHSVELPSPQEPKFFLYHRIDPIAAHASSRQLANNSLPSSINEISISKFYPRTPPYILFSIITQKEIPDMHNHHDMIMLMWSINRITMPWKSFKLIFLCIFVCFFFNFATTTKAQDADPLIIGQICSANRTTANSAYEKNLNTLLSSLSSNANATLFYNNTVLGSTNSSDTVYGLFMCRGDVPSQLCARCVVNATERLSSDPECSLSIKGVIWYDECMVRYSNVTFFSTVDTRPSYYMWNLANISSNPENFNNLLASTFRKTAEEAANSGNRYSTKQANLSEFQTLYCLAQCTQDLSPQHCRDCLDSAESKIQICCDGKQGGRVFFPSCNIRYQLYPFYRNLTYEASEALVPETKYPERDSEYSEDPGYIYHNCSTNQNVNDTAFQSDRKTLFSDLSSNATSGDRYSVKAGTLRGLFRCRGDLSRYLCGQCVQNATEKILSECGWATDVTIWYNHCWLRYSNRSFTMETSPSYQKWNASNTNSVPFSEALTFISTRLSVVASETGDTSNKYQTVPLKLNDRQWLYILAQCTLDISNEDCSACLNDMIGVIPWARLGSVGGRMLYPSCILRFELFQFYNLSPTTPTNTSPSGNNSRTIIIILIPTFIVLGILSTLCFYLITRKARKNNKIILRENFGQESSTIESLQFNFATIEAATNNFSHENKIGRGGFGEVYKGILIDGRPIAVKRLSRNSKQGVEEFKNEVLLIAKLQHRNLVAFIGFCLDEQEKILIYEYVPNKSLDYFLFDTKLEKVLSWSDRHKIIGGIARGILYLHEHSRLKVIHRDLKPSNVLLDENMNPKISDFGLARIVEIDQQEGSTNRIIGTYGYMSPEYAMFGQFSDKSDVYSFGVMILEIISGKKNIGSYEPHRVADGLLNFVWRHWKDETPLNTLDPKLRDNYSNIEVIKCIRIGLLCVQENPDARPTMLTIVSYLSSHSIELPSPQEPTFFLYHRMDPTVAHESSSRQSTNNSIPSSINEMSISKFYPR* 1607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1780 1606 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Gso18g1780 1606 Pfam Protein kinase domain 349 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1780 1606 SUPERFAMILY Protein kinase-like (PK-like) 332 652 IPR011009 -
Gso18g1780 1606 MobiDBLite consensus disorder prediction 1578 1606 - -
Gso18g1780 1606 ProSiteProfiles Gnk2-homologous domain profile. 740 847 IPR002902 -
Gso18g1780 1606 Gene3D Phosphorylase Kinase; domain 1 309 423 - -
Gso18g1780 1606 Gene3D Phosphorylase Kinase; domain 1 1241 1355 - -
Gso18g1780 1606 ProSiteProfiles Gnk2-homologous domain profile. 988 1086 IPR002902 -
Gso18g1780 1606 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 727 967 - -
Gso18g1780 1606 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1210 1596 - -
Gso18g1780 1606 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 21 258 - -
Gso18g1780 1606 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 273 662 - -
Gso18g1780 1606 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 980 1203 - -
Gso18g1780 1606 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Gso18g1780 1606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1401 1413 IPR008271 GO:0004672|GO:0006468
Gso18g1780 1606 ProSiteProfiles Protein kinase domain profile. 1280 1558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1780 1606 CDD STKc_IRAK 1286 1552 - -
Gso18g1780 1606 ProSitePatterns Protein kinases ATP-binding region signature. 1286 1308 IPR017441 GO:0005524
Gso18g1780 1606 SUPERFAMILY Protein kinase-like (PK-like) 1263 1587 IPR011009 -
Gso18g1780 1606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Gso18g1780 1606 ProSiteProfiles Protein kinase domain profile. 348 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1780 1606 SMART serkin_6 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1780 1606 SMART serkin_6 1280 1552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1780 1606 Pfam Salt stress response/antifungal 747 844 IPR002902 -
Gso18g1780 1606 Pfam Salt stress response/antifungal 995 1083 IPR002902 -
Gso18g1780 1606 Pfam Salt stress response/antifungal 39 137 IPR002902 -
Gso18g1780 1606 Pfam Salt stress response/antifungal 162 251 IPR002902 -
Gso18g1780 1606 Pfam Salt stress response/antifungal 1101 1193 IPR002902 -
Gso18g1780 1606 Pfam Salt stress response/antifungal 869 956 IPR002902 -
Gso18g1780 1606 ProSiteProfiles Gnk2-homologous domain profile. 32 140 IPR002902 -
Gso18g1780 1606 Gene3D - 1091 1197 IPR038408 -
Gso18g1780 1606 Gene3D - 740 847 IPR038408 -
Gso18g1780 1606 Gene3D - 147 253 IPR038408 -
Gso18g1780 1606 Gene3D - 987 1086 IPR038408 -
Gso18g1780 1606 Gene3D - 853 959 IPR038408 -
Gso18g1780 1606 Gene3D - 31 140 IPR038408 -
Gso18g1780 1606 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 273 662 - -
Gso18g1780 1606 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 980 1203 - -
Gso18g1780 1606 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 21 258 - -
Gso18g1780 1606 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 727 967 - -
Gso18g1780 1606 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 1210 1596 - -
Gso18g1780 1606 MobiDBLite consensus disorder prediction 262 281 - -
Gso18g1780 1606 ProSiteProfiles Gnk2-homologous domain profile. 853 959 IPR002902 -
Gso18g1780 1606 Gene3D Transferase(Phosphotransferase) domain 1 424 630 - -
Gso18g1780 1606 Gene3D Transferase(Phosphotransferase) domain 1 1356 1561 - -
Gso18g1780 1606 MobiDBLite consensus disorder prediction 1579 1600 - -
Gso18g1780 1606 Pfam Protein tyrosine and serine/threonine kinase 1283 1552 IPR001245 GO:0004672|GO:0006468
Gso18g1780 1606 ProSiteProfiles Gnk2-homologous domain profile. 1090 1197 IPR002902 -
Gso18g1780 1606 CDD STKc_IRAK 354 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1780 Gso-Chr18 50214474 50225609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1780 721 960 Receptor kinase-like Gene Family AT4G05200 42.213 1.89e-48 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso18g1780 PK_Tyr_Ser-Thr 9.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1780 - - gsj:114397380 3151.3