Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1774 ATGTACAAGTCAAAGTGGCTGAGCCAAAGAGTGGAGATGGAAGTTGAAGGTCAGTGGCAGATTTCACAGAGAGAGATATGCTGGTCAATGATGTTCATAGCTTCATGGAGCATCATTGTATTATTATATGTGAAACTGTGGTATAGATCTCAAAGGATCAGATCAGTGCTTCAGAAACAAGGCATCAATGGACCAAAACCTTCTTTCCCCTTTGGCAACCTTTCTGAGATGCAACAGCTCAACCAAGGTGCTCCTGTTTCTCTTGAAGCCTTAGACAAATGGGCTTTTTCCCTCTACCCCTTTTTCCATACATGGAGGCAACGCTATGGTCCAGTGTTCATGTACTCCACTGGAACCAAACAACATCTATATGTGGAAATACCCGAATTAATGAAATGGATAGGTCTGAACACATCCTTGGACCTGGGCCGGCCATCGCATCTAACAAAAACATTGAAGCCCTTGCTGGGTGATGGCATCATCATGTCTAATGGACTACATTGGGCCTTCCAAAGGAATTTGCTTGTTCCTGAGTTTTTCCAGAGCAAAATTAAGAATTGGGTGGATATAATGGGAGAATCAACCATGGCAATTATCAAAAAATGGGAGAGCCATATAACAGAAAGTGAAGGGGGGATTGCAGAGCTGGTGATTGATGGAGATATGAAGACTCTTACAGCGGATGTCATTTCCAAAGTTTGTTTTGGCACCTCTTATGCTCTAGGAAATTTAATTTTTGCAAAACTGGCCTCCATGCAAGCTATACTAGCAAAGTCTAGTGTTCTATTTGGATTTCTAAACCTAAGGTTTCTTCCCACCAAGGAAAACAAAGAGCTGTGGAAGTTGCAGAAAGAGGTGGAAACGATGATACTAAAAGTGATCAAAGACCGTGAAGGAGAAAACCAAAAGAGTGGCACACATGAGAATGAAAAGGATCTATTACAAATAATACTAGAAGGTGCTGCCAATGCCACCACTGGTACTAGTGGAAAGGGTATTTTTGGGTCCCGGTATAACATAAACCAGTTGATTATAGACATTTGCAAAAATATTTACTTTGCAGGCTATGAGAGTAGTGCTCTTGCAATTATTTGGACACTGCTGCTACTTGCCTTACACCCTGAGTGGCAACAACGAATTAGATCAGAGATTATGGAGACCTATGATAACACGGTGCCTCATTCCTTTCTTGACATGGACAAACTTCGAAACTTGAAAGCACTAACAATGGTGATTCAAGAGAGTCTACGACTTTATGGGCCTTCAACTATGGCCACAAGGGAAGTGTTGGCCAATGAGATGAAGTTGGGGGAATATGTGCTGCCTAAAGGCATCAACTTGTGGTTGTTCACACTTGCGTTGCACCGTGACCCTGATAACTGGGGACCAGATGCTAGGGAATTCAAGCCAGAAAGGTTTGCTGGTGGTGTTTCTTTAGCCTGTAAGTACCCTCAAGCTTATATACCATTTGGTCTCGGGGGTCGAATTTGCTTGGGCCAAAACTTTGCCTTGCTACAAATGAAGGAAGTTCTGTGTCTTCTTCTGTCCAACTTCTCCTTTGCTGTTTCACCAAACTATTGCCATTGCCCTGTGGATAGTTTTCTGTTAATGCCAAAATATGGTGTAAGACTTCTTGTTAGCAAGGTTCACAAGACTAGTGCGTAG 1665 0.4252 MYKSKWLSQRVEMEVEGQWQISQREICWSMMFIASWSIIVLLYVKLWYRSQRIRSVLQKQGINGPKPSFPFGNLSEMQQLNQGAPVSLEALDKWAFSLYPFFHTWRQRYGPVFMYSTGTKQHLYVEIPELMKWIGLNTSLDLGRPSHLTKTLKPLLGDGIIMSNGLHWAFQRNLLVPEFFQSKIKNWVDIMGESTMAIIKKWESHITESEGGIAELVIDGDMKTLTADVISKVCFGTSYALGNLIFAKLASMQAILAKSSVLFGFLNLRFLPTKENKELWKLQKEVETMILKVIKDREGENQKSGTHENEKDLLQIILEGAANATTGTSGKGIFGSRYNINQLIIDICKNIYFAGYESSALAIIWTLLLLALHPEWQQRIRSEIMETYDNTVPHSFLDMDKLRNLKALTMVIQESLRLYGPSTMATREVLANEMKLGEYVLPKGINLWLFTLALHRDPDNWGPDAREFKPERFAGGVSLACKYPQAYIPFGLGGRICLGQNFALLQMKEVLCLLLSNFSFAVSPNYCHCPVDSFLLMPKYGVRLLVSKVHKTSA* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1774 554 SUPERFAMILY Cytochrome P450 93 546 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PANTHER CYTOCHROME P450 FAMILY MEMBER 21 544 - -
Gso18g1774 554 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 490 499 IPR017972 GO:0005506|GO:0016705
Gso18g1774 554 PANTHER CYTOCHROME P450 FAMILY PROTEIN 21 544 - -
Gso18g1774 554 PRINTS E-class P450 group I signature 106 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PRINTS E-class P450 group I signature 225 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PRINTS E-class P450 group I signature 343 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PRINTS E-class P450 group I signature 363 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PRINTS E-class P450 group I signature 451 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PRINTS E-class P450 group I signature 487 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PRINTS E-class P450 group I signature 497 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 Pfam Cytochrome P450 99 544 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 Gene3D Cytochrome P450 46 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PRINTS P450 superfamily signature 354 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PRINTS P450 superfamily signature 410 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PRINTS P450 superfamily signature 488 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso18g1774 554 PRINTS P450 superfamily signature 497 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1774 Gso-Chr18 50151735 50156142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1774 130 546 Cytochrome P450 AT5G24900 42.518 7.64e-123 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1774 - - gmx:100802008 1114.37