Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1755 ATGATGCTACAGTCCTACTTTACCACAATACCAATTTTCCTACTCCTGCTTGTGTTTACTCGAACTAAAGCTGATCTACAGTCAGAAAAGCAAGCCCTCCTTGATTTTGCTGCTGCACTTCATCATGGTCCAAAGGTCAATTGGAACTCTAGTACCTCAATCTGCACTTCATGGGTGGGAGTTACATGCAGTCATGATGGCTCTCATGTGCTTTCTGTGAGGCTTCCAGGTGTCGGATTGCGTGGTTTTCTCCCACCAAGAACACTTGGTAAGCTTAATGGCCTCATTAGTCTCAGTCTTAGGTCCAACAGCTTGAGGGGGAACCTTCCAACTGACCTACTTTCCCTTCCTTCCCTGCGCTTTGTATATCTCCAACACAACAACTTCTCAGGTGTTATTCCTGATTCTCTGCCACCGCGGCTTATCTTTCTTGATTTGTCCCATAACTCTTTTACAGGACAAATTCCAGCCTCAATCCAAAACTTGACACATCTGATAGGATTTAACCTCCAAAACAACTCTCTCACAGGACCTATTCCTGATGTTAACCTTCCTAGCCTTAAGGATTTGGATTTGAGCTTCAACTACTTGAATGGATCTATTCCTTCAGGTCTCCATAAGTTTCCTGCCTCCTCATTTAGAGGGAATTTGATGTTATGTGGAGCACCTTTGAAACAATGTTCTTCAGTTTCCCCTAATACCACATTGTCTCCACCAACAGTCTCTCAAAGACCAAGTGATCTATCAAACAGGAAAATGAGCAAGGGAGCAAAAATAGCAATTGTTTTGGGGGGTGTCACATTGCTGTTTCTTCCAGGTCTCTTAGTAGTGTTCTTCTGTTTCAAGAAAAAAGTTGGTGAACAAAATGTAGCACCTAAAGAGAAAGGTCAGAAGCTTAAGGAGGACTTTGGGAGTGGTGTGCAAGAGCCCGAGAGAAACAAGCTTGTATTCTTTGAAGGTTGTTCTTATAATTTTGATCTGGAGGACTTGTTAAGAGCTTCAGCTGAAGTCCTTGGGAAGGGAAGTTGTGGAACAACATACAAAGCCATCTTGGAGGATGGAACAACAGTAGTTGTGAAGAGGTTAAGAGAAGTGGCAATGGGAAAAAAAGAATTTGAACAGCAAATGGAGATTGTCCAAAGACTTGATCATCACCCAAATGTGATTCCCCTTCGTGCTTACTACTATTCCAAAGATGAAAAACTAATGGTTTATGACTACTCAACAGCCGGCAGTTTTTCCAAGTTATTGCATGGAACAACGGAAACTGGACGAGCTCCTCTAGATTGGCATACAAGATTGAAGATCATAGTTGGAGCTGCTAGGGGCCTTGCTCATATCCACTCAGCCAATGGAAAGAAACTTGTCCATGGCAATATAAAATCATCTAATGTGATTCTCTCAATAGATCTTCAAGGCTGCATATCAGATTTTGGCCTAACTCCCCTAACAAATTTCTGTGGTTCCTCCAGAAGTCCAGGCTATGGATCACCTGAAGTTATCGAATCACGAAAATCAACTCAAAAATCTGATGTGTACAGCTTTGGTGTTCTCCTCCTTGAGATGCTGACTGGCAAAACACCAGTTCAGTATTCAGGGCATGATGAAGTGGTTGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGGTATCCGAACATTGAAGATGAACTTGTGCAGATGCTGCAACTGGCAATGGCATGCGTGGCAGTGATGCCGGACGCGAGACCTTCAATGGAGGAAGTTGTCAGGACAATTGAAGAACTTAGAGCATCCATTTATTAA 1824 0.4282 MMLQSYFTTIPIFLLLLVFTRTKADLQSEKQALLDFAAALHHGPKVNWNSSTSICTSWVGVTCSHDGSHVLSVRLPGVGLRGFLPPRTLGKLNGLISLSLRSNSLRGNLPTDLLSLPSLRFVYLQHNNFSGVIPDSLPPRLIFLDLSHNSFTGQIPASIQNLTHLIGFNLQNNSLTGPIPDVNLPSLKDLDLSFNYLNGSIPSGLHKFPASSFRGNLMLCGAPLKQCSSVSPNTTLSPPTVSQRPSDLSNRKMSKGAKIAIVLGGVTLLFLPGLLVVFFCFKKKVGEQNVAPKEKGQKLKEDFGSGVQEPERNKLVFFEGCSYNFDLEDLLRASAEVLGKGSCGTTYKAILEDGTTVVVKRLREVAMGKKEFEQQMEIVQRLDHHPNVIPLRAYYYSKDEKLMVYDYSTAGSFSKLLHGTTETGRAPLDWHTRLKIIVGAARGLAHIHSANGKKLVHGNIKSSNVILSIDLQGCISDFGLTPLTNFCGSSRSPGYGSPEVIESRKSTQKSDVYSFGVLLLEMLTGKTPVQYSGHDEVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEDELVQMLQLAMACVAVMPDARPSMEEVVRTIEELRASIY* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1755 607 Gene3D Ribonuclease Inhibitor 139 229 IPR032675 -
Gso18g1755 607 Gene3D Phosphorylase Kinase; domain 1 299 407 - -
Gso18g1755 607 ProSiteProfiles Protein kinase domain profile. 332 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1755 607 SUPERFAMILY L domain-like 44 224 - -
Gso18g1755 607 Pfam Protein kinase domain 335 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1755 607 SUPERFAMILY Protein kinase-like (PK-like) 336 599 IPR011009 -
Gso18g1755 607 PANTHER OS05G0588300 PROTEIN 10 605 - -
Gso18g1755 607 CDD STKc_IRAK 338 602 - -
Gso18g1755 607 Gene3D Ribonuclease Inhibitor 24 138 IPR032675 -
Gso18g1755 607 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Gso18g1755 607 PANTHER OS05G0480400 PROTEIN 10 605 - -
Gso18g1755 607 MobiDBLite consensus disorder prediction 230 250 - -
Gso18g1755 607 Gene3D Transferase(Phosphotransferase) domain 1 409 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1755 Gso-Chr18 49924740 49928255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1755 24 605 Receptor kinase-like Gene Family AT5G58300 60.678 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso18g1755 Pkinase 5.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1755 - - gmx:100796675 1181.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1755 18 49924740 49928255 Gso9g2252 9 46802998 46806454 GST