Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso18g1748 ATGGCTTCTCTGCTCTCTACAACTGCAACCACACTTCAACATAATCACACAATCTGCTTCTCCCCTGTCAAACCCACCACCGCAAATACCATTCCCTTCTCAACAAACCGTTGTTTCAAGAACAACTCTGCAAAGTGCAATGCTTTTTTTGATAAATTCCCCAAAGACTTGTTGGAGACCACTTTTCATTTGGACCAGTTCCCTGTCTTCCAATCAGTGATAGTGAAGTTTCAGAATGTAACTGAAGACTTATCAGACGTGCAGAGGTGGGGGCTTGTGATCCTAGCAGGGCTGACATGGGCTTATTTCACCGCGAGGCCCGGTGTTCTCGTCGGCGCCATTGATGCATTCCTCTTGGCTCCTATCCAACTGGTTTTGGACAGTTTATCTGGAAGGAGGAATCTGAAGAGGACTGATTTTCTTGTTGGAGATAAGCTTGGAGAAGGGTCATTTGGTGTTGTTTATTCGGGTGTTTTGGTCCCAAGGAATGTGGATGTGCAAGAGTGGATGCAGAAAAGTGGAAGGGACAAGGTGGCTAAGTTGGATGCCAAATCTAAGGATAAAGTCGTTCTTAAAAAGGTAAAGGTTGGAATTGAAGGAGCAGAGGAATTTGGTGATTTTGAAGAGTGGTTCAATTATAGACTCTCTAGAGCAGCTCCTGAAACATGTGCTAAGTTTCTTGGTAGTTTTGTAGCTGATAAAACCAATTCACAGTTCACAAAAGGTGGAAAATGGCTTGTTTGGAAGTTTGAGGGAGGCCGATCTCTTGCTGATTACATGGCTGATCAAAGCTTCCCTTCAAACTTAGAGTCTATCATGTTTGGACGTGTCTTGCAAGGCGTCGACTCTTCTAAACGAAATGCATTGATCATCAAGCAAATAATGCGCCAGATAATTACATCTCTTAAGAAAATTCACGACATAGGCATTGTACACAGGGATGTTAAGCCTGCCAACTTGGTGGTTACCAAACGGGGGCAGATTAAACTCATTGATTTTGGTGCTGCGACAGACCTTCGAATTGGAAAGAATTATGTTCCTAATCGTACCCCTTTGGATCGTGACTACTGTCCCCCTGAGCTATACGTGTTACCAGAAGAAACACTAAGTCTCCCACCAGAGCCTATTGCAGCTTTCCTTTCACCCATCTTGTGGCAGTTAAACAGTCCTGATCTGTTTGATATGTATTCTGCCGGGATTGTACTCCTGCAAATGGCAATACCAACCTTAAGGTCTCCAGCTGCTTTGAAGAATTTCAATTTGGAGATAAGAACATGTGGATATGATTTGAACAAATGGAGGGCATCTACTCGCATGAGGTCTGACTTCCAAATTCTTGATAGTGACTCTAGTAGAGGGTGGGACTTAGCAACAAAGCTTATCTCCAAGAGAGGTTCCCAAAGAAGAGGACGCTTATCTGCTGCTGCTGCCTTGAGGCACCCTTATTTCCTTCTGGGTGGGGATCAGGCAGCCGCAGTTCTTTCTAAGTTAAGCTTAAGCACAAAGTGA 1509 0.4414 MASLLSTTATTLQHNHTICFSPVKPTTANTIPFSTNRCFKNNSAKCNAFFDKFPKDLLETTFHLDQFPVFQSVIVKFQNVTEDLSDVQRWGLVILAGLTWAYFTARPGVLVGAIDAFLLAPIQLVLDSLSGRRNLKRTDFLVGDKLGEGSFGVVYSGVLVPRNVDVQEWMQKSGRDKVAKLDAKSKDKVVLKKVKVGIEGAEEFGDFEEWFNYRLSRAAPETCAKFLGSFVADKTNSQFTKGGKWLVWKFEGGRSLADYMADQSFPSNLESIMFGRVLQGVDSSKRNALIIKQIMRQIITSLKKIHDIGIVHRDVKPANLVVTKRGQIKLIDFGAATDLRIGKNYVPNRTPLDRDYCPPELYVLPEETLSLPPEPIAAFLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSPAALKNFNLEIRTCGYDLNKWRASTRMRSDFQILDSDSSRGWDLATKLISKRGSQRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLSTK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso18g1748 502 Gene3D Phosphorylase Kinase; domain 1 127 250 - -
Gso18g1748 502 ProSiteProfiles Protein kinase domain profile. 140 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1748 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Gso18g1748 502 SMART serkin_6 140 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1748 502 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 2 500 IPR044803 GO:0004674|GO:0009579
Gso18g1748 502 SUPERFAMILY Protein kinase-like (PK-like) 137 484 IPR011009 -
Gso18g1748 502 Gene3D Transferase(Phosphotransferase) domain 1 281 485 - -
Gso18g1748 502 Pfam Protein kinase domain 290 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso18g1748 502 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 2 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso18g1748 Gso-Chr18 49864508 49868616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso18g1748 140 339 MAP Kinase Kinase Kinase AT3G13530 25.123 5.87e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Gso18g1748 Pkinase 1.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso18g1748 - - gmx:100795624 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0023 3 218342 221752 Gso18g1748 18 49864508 49868616 PCT